ome-files  0.1.1
MinimalTIFFReader.h
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3  * OME-FILES C++ library for image IO.
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37 
38 #ifndef OME_FILES_IN_MINIMALTIFFREADER_H
39 #define OME_FILES_IN_MINIMALTIFFREADER_H
40 
41 #include <ome/files/detail/FormatReader.h>
42 
43 #include <ome/files/tiff/Util.h>
44 
45 #include <vector>
46 
47 namespace ome
48 {
49  namespace files
50  {
51  namespace tiff
52  {
53 
54  class TIFF;
55  class IFD;
56 
57  }
58 
60  namespace in
61  {
62 
70  {
71  protected:
73  ome::compat::shared_ptr<ome::files::tiff::TIFF> tiff;
74 
77 
78  public:
81 
84 
86  virtual
88 
89  protected:
90  // Documented in superclass.
91  void
92  initFile(const boost::filesystem::path& id);
93 
97  virtual
98  void
99  readIFDs();
100 
101  // Documented in superclass.
102  bool
103  isFilenameThisTypeImpl(const boost::filesystem::path& name) const;
104 
112  const ome::compat::shared_ptr<const tiff::IFD>
113  ifdAtIndex(dimension_size_type plane) const;
114 
115  public:
116  // Documented in superclass.
117  void
118  close(bool fileOnly = false);
119 
120  // Documented in superclass.
121  void
122  getLookupTable(dimension_size_type plane,
123  VariantPixelBuffer& buf) const;
124 
125  protected:
126  // Documented in superclass.
127  void
128  openBytesImpl(dimension_size_type plane,
129  VariantPixelBuffer& buf,
133  dimension_size_type h) const;
134 
135  public:
143  ome::compat::shared_ptr<ome::files::tiff::TIFF>
144  getTIFF();
145 
153  const ome::compat::shared_ptr<ome::files::tiff::TIFF>
154  getTIFF() const;
155  };
156 
157  }
158  }
159 }
160 
161 #endif // OME_FILES_IN_MINIMALTIFFREADER_H
162 
163 /*
164  * Local Variables:
165  * mode:C++
166  * End:
167  */
Basic TIFF reader.
Definition: MinimalTIFFReader.h:69
Properties specific to a particular reader.
Definition: FormatReader.h:64
std::vector< IFDRange > SeriesIFDRange
Mapping between series index and IFD range.
Definition: Util.h:104
Tagged Image File Format (TIFF).
Definition: TIFF.h:156
std::size_t dimension_size_type
Size type for image dimensions.
Definition: Types.h:59
Interface for all biological file format readers (default behaviour).
Definition: FormatReader.h:107
tiff::SeriesIFDRange seriesIFDRange
Mapping between series index and start and end IFD as a half-open range.
Definition: MinimalTIFFReader.h:76
ome::compat::shared_ptr< ome::files::tiff::TIFF > tiff
Underlying TIFF file.
Definition: MinimalTIFFReader.h:73
Image File Directory (IFD).
Definition: IFD.h:71
Buffer for all pixel types.
Definition: VariantPixelBuffer.h:75