ome-files 0.1.0

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ome::files::FormatReader Member List

This is the complete list of members for ome::files::FormatReader, including all inherited members.

assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true) | ome::files::FormatHandler | inline static
CAN_GROUP enum value | ome::files::FormatReader |
CANNOT_GROUP enum value | ome::files::FormatReader |
checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix) | ome::files::FormatHandler | inline static
checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes) | ome::files::FormatHandler | inline static
checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes) | ome::files::FormatHandler | inline static
close(bool fileOnly=false)=0 | ome::files::FormatHandler | pure virtual
coreIndexToSeries(dimension_size_type index) const =0 | ome::files::FormatReader | pure virtual
fileGroupOption(const std::string &id)=0 | ome::files::FormatReader | pure virtual
FileGroupOption enum name | ome::files::FormatReader |
FormatHandler() | ome::files::FormatHandler | inline protected
FormatReader() | ome::files::FormatReader | inline protected
FormatReader(const FormatReader &) | ome::files::FormatReader | private
getAdvancedSeriesUsedFiles(bool noPixels=false) const =0 | ome::files::FormatReader | pure virtual
getAdvancedUsedFiles(bool noPixels=false) const =0 | ome::files::FormatReader | pure virtual
getBitsPerPixel() const =0 | ome::files::FormatReader | pure virtual
getCompressionSuffixes() const =0 | ome::files::FormatHandler | pure virtual
getCoreIndex() const =0 | ome::files::FormatReader | pure virtual
getCoreMetadataList() const =0 | ome::files::FormatReader | pure virtual
getCurrentFile() const =0 | ome::files::FormatReader | pure virtual
getDatasetStructureDescription() const =0 | ome::files::FormatReader | pure virtual
getDimensionOrder() const =0 | ome::files::FormatReader | pure virtual
getDomains() const =0 | ome::files::FormatReader | pure virtual
getEffectiveSizeC() const =0 | ome::files::FormatReader | pure virtual
getFormat() const =0 | ome::files::FormatHandler | pure virtual
getFormatDescription() const =0 | ome::files::FormatHandler | pure virtual
getGlobalMetadata() const =0 | ome::files::FormatReader | pure virtual
getImageCount() const =0 | ome::files::FormatReader | pure virtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t) const =0 | ome::files::FormatReader | pure virtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t, dimension_size_type moduloZ, dimension_size_type moduloC, dimension_size_type moduloT) const =0 | ome::files::FormatReader | pure virtual
getLookupTable(dimension_size_type plane, VariantPixelBuffer &buf) const =0 | ome::files::FormatReader | pure virtual
getMetadataOptions() const =0 | ome::files::MetadataConfigurable | pure virtual
getMetadataOptions()=0 | ome::files::MetadataConfigurable | pure virtual
getMetadataStore() const =0 | ome::files::FormatReader | pure virtual
getMetadataStore()=0 | ome::files::FormatReader | pure virtual
getMetadataValue(const std::string &field) const =0 | ome::files::FormatReader | pure virtual
getModuloC()=0 | ome::files::FormatReader | pure virtual
getModuloC() const =0 | ome::files::FormatReader | pure virtual
getModuloT()=0 | ome::files::FormatReader | pure virtual
getModuloT() const =0 | ome::files::FormatReader | pure virtual
getModuloZ()=0 | ome::files::FormatReader | pure virtual
getModuloZ() const =0 | ome::files::FormatReader | pure virtual
getOptimalTileHeight(dimension_size_type channel) const =0 | ome::files::FormatReader | pure virtual
getOptimalTileHeight() const =0 | ome::files::FormatReader | pure virtual
getOptimalTileWidth(dimension_size_type channel) const =0 | ome::files::FormatReader | pure virtual
getOptimalTileWidth() const =0 | ome::files::FormatReader | pure virtual
getPixelType() const =0 | ome::files::FormatReader | pure virtual
getPlane() const =0 | ome::files::FormatReader | pure virtual
getPossibleDomains(const std::string &id) const =0 | ome::files::FormatReader | pure virtual
getRequiredDirectories(const std::vector< std::string > &files) const =0 | ome::files::FormatReader | pure virtual
getResolution() const =0 | ome::files::FormatReader | pure virtual
getResolutionCount() const =0 | ome::files::FormatReader | pure virtual
getRGBChannelCount(dimension_size_type channel) const =0 | ome::files::FormatReader | pure virtual
getSeries() const =0 | ome::files::FormatReader | pure virtual
getSeriesCount() const =0 | ome::files::FormatReader | pure virtual
getSeriesMetadata() const =0 | ome::files::FormatReader | pure virtual
getSeriesMetadataValue(const MetadataMap::key_type &field) const =0 | ome::files::FormatReader | pure virtual
getSeriesUsedFiles(bool noPixels=false) const =0 | ome::files::FormatReader | pure virtual
getSizeC() const =0 | ome::files::FormatReader | pure virtual
getSizeT() const =0 | ome::files::FormatReader | pure virtual
getSizeX() const =0 | ome::files::FormatReader | pure virtual
getSizeY() const =0 | ome::files::FormatReader | pure virtual
getSizeZ() const =0 | ome::files::FormatReader | pure virtual
getSuffixes() const =0 | ome::files::FormatHandler | pure virtual
getSupportedMetadataLevels()=0 | ome::files::MetadataConfigurable | pure virtual
getThumbSizeX() const =0 | ome::files::FormatReader | pure virtual
getThumbSizeY() const =0 | ome::files::FormatReader | pure virtual
getUnderlyingReaders() const =0 | ome::files::FormatReader | pure virtual
getUsedFiles(bool noPixels=false) const =0 | ome::files::FormatReader | pure virtual
getZCTCoords(dimension_size_type index) const =0 | ome::files::FormatReader | pure virtual
getZCTModuloCoords(dimension_size_type index) const =0 | ome::files::FormatReader | pure virtual
hasCompanionFiles() const =0 | ome::files::FormatReader | pure virtual
hasFlattenedResolutions() const =0 | ome::files::FormatReader | pure virtual
isFalseColor() const =0 | ome::files::FormatReader | pure virtual
isGroupFiles() const =0 | ome::files::FormatReader | pure virtual
isIndexed() const =0 | ome::files::FormatReader | pure virtual
isInterleaved() const =0 | ome::files::FormatReader | pure virtual
isInterleaved(dimension_size_type channel) const =0 | ome::files::FormatReader | pure virtual
isLittleEndian() const =0 | ome::files::FormatReader | pure virtual
isMetadataComplete() const =0 | ome::files::FormatReader | pure virtual
isMetadataFiltered() const =0 | ome::files::FormatReader | pure virtual
isNormalized() const =0 | ome::files::FormatReader | pure virtual
isOrderCertain() const =0 | ome::files::FormatReader | pure virtual
isOriginalMetadataPopulated() const =0 | ome::files::FormatReader | pure virtual
isRGB(dimension_size_type channel) const =0 | ome::files::FormatReader | pure virtual
isSingleFile(const boost::filesystem::path &id) const =0 | ome::files::FormatReader | pure virtual
isThisType(const boost::filesystem::path &name, bool open=true) const =0 | ome::files::FormatReader | pure virtual
isThisType(const uint8_t *begin, const uint8_t *end) const =0 | ome::files::FormatReader | pure virtual
isThisType(const uint8_t *begin, std::size_t length) const =0 | ome::files::FormatReader | pure virtual
isThisType(std::istream &stream) const =0 | ome::files::FormatReader | pure virtual
isThumbnailSeries() const =0 | ome::files::FormatReader | pure virtual
MetadataConfigurable() | ome::files::MetadataConfigurable | protected
MUST_GROUP enum value | ome::files::FormatReader |
openBytes(dimension_size_type plane, VariantPixelBuffer &buf) const =0 | ome::files::FormatReader | pure virtual
openBytes(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) const =0 | ome::files::FormatReader | pure virtual
openThumbBytes(dimension_size_type plane, VariantPixelBuffer &buf) const =0 | ome::files::FormatReader | pure virtual
operator=(const FormatReader &) | ome::files::FormatReader | private
seriesToCoreIndex(dimension_size_type series) const =0 | ome::files::FormatReader | pure virtual
setCoreIndex(dimension_size_type index) const =0 | ome::files::FormatReader | pure virtual
setFlattenedResolutions(bool flatten)=0 | ome::files::FormatReader | pure virtual
setGroupFiles(bool group)=0 | ome::files::FormatReader | pure virtual
setId(const boost::filesystem::path &id)=0 | ome::files::FormatHandler | pure virtual
setMetadataFiltered(bool filter)=0 | ome::files::FormatReader | pure virtual
setMetadataOptions(const MetadataOptions &options)=0 | ome::files::MetadataConfigurable | pure virtual
setMetadataStore(ome::compat::shared_ptr< ::ome::xml::meta::MetadataStore > &store)=0 | ome::files::FormatReader | pure virtual
setNormalized(bool normalize)=0 | ome::files::FormatReader | pure virtual
setOriginalMetadataPopulated(bool populate)=0 | ome::files::FormatReader | pure virtual
setPlane(dimension_size_type plane) const =0 | ome::files::FormatReader | pure virtual
setResolution(dimension_size_type resolution) const =0 | ome::files::FormatReader | pure virtual
setSeries(dimension_size_type series) const =0 | ome::files::FormatReader | pure virtual
~FormatHandler() | ome::files::FormatHandler | inline virtual
~FormatReader() | ome::files::FormatReader | inline virtual
~MetadataConfigurable() | ome::files::MetadataConfigurable | virtual