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ome::files::in::TIFFReader Member List

This is the complete list of members for ome::files::in::TIFFReader, including all inherited members.

ome::assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true) | ome::files::FormatHandler | inline static
ome::files::FormatHandler::assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true) | ome::files::FormatHandler | inline static
CAN_GROUP enum value | ome::files::FormatReader |
CANNOT_GROUP enum value | ome::files::FormatReader |
ome::checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix) | ome::files::FormatHandler | inline static
ome::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes) | ome::files::FormatHandler | inline static
ome::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes) | ome::files::FormatHandler | inline static
ome::files::FormatHandler::checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix) | ome::files::FormatHandler | inline static
ome::files::FormatHandler::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes) | ome::files::FormatHandler | inline static
ome::files::FormatHandler::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes) | ome::files::FormatHandler | inline static
close(bool fileOnly=false) | ome::files::in::TIFFReader | virtual
companionFiles | ome::files::detail::FormatReader | protected
core | ome::files::detail::FormatReader | protected
coreIndex | ome::files::detail::FormatReader | mutable protected
coreIndexToSeries(dimension_size_type index) const | ome::files::detail::FormatReader | virtual
coremetadata_list_type typedef | ome::files::detail::FormatReader | protected
currentId | ome::files::detail::FormatReader | protected
datasetDescription | ome::files::detail::FormatReader | protected
domains | ome::files::detail::FormatReader | protected
FileGroupOption enum name | ome::files::FormatReader |
fileGroupOption(const std::string &id) | ome::files::detail::FormatReader | virtual
filterMetadata | ome::files::detail::FormatReader | protected
flattenedResolutions | ome::files::detail::FormatReader | protected
ome::FormatHandler() | ome::files::FormatHandler | inline protected
ome::files::FormatHandler::FormatHandler() | ome::files::FormatHandler | inline protected
FormatReader(const ReaderProperties &) | ome::files::detail::FormatReader | protected
ome::files::FormatReader::FormatReader() | ome::files::FormatReader | inline protected
getAdvancedSeriesUsedFiles(bool noPixels=false) const | ome::files::detail::FormatReader | virtual
getAdvancedUsedFiles(bool noPixels=false) const | ome::files::detail::FormatReader | virtual
getBitsPerPixel() const | ome::files::detail::FormatReader | virtual
getCompressionSuffixes() const | ome::files::detail::FormatReader | virtual
getCoreIndex() const | ome::files::detail::FormatReader | virtual
getCoreMetadata(dimension_size_type index) const | ome::files::detail::FormatReader | inline protected
getCoreMetadata(dimension_size_type index) | ome::files::detail::FormatReader | inline protected
getCoreMetadataList() const | ome::files::detail::FormatReader | virtual
getCurrentFile() const | ome::files::detail::FormatReader | virtual
getDatasetStructureDescription() const | ome::files::detail::FormatReader | virtual
getDimensionOrder() const | ome::files::detail::FormatReader | virtual
getDomains() const | ome::files::detail::FormatReader | virtual
getEffectiveSizeC() const | ome::files::detail::FormatReader | virtual
getFormat() const | ome::files::detail::FormatReader | virtual
getFormatDescription() const | ome::files::detail::FormatReader | virtual
getGlobalMetadata() const | ome::files::detail::FormatReader | virtual
getImageCount() const | ome::files::detail::FormatReader | virtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t) const | ome::files::detail::FormatReader | virtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t, dimension_size_type moduloZ, dimension_size_type moduloC, dimension_size_type moduloT) const | ome::files::detail::FormatReader | virtual
getLookupTable(dimension_size_type plane, VariantPixelBuffer &buf) const | ome::files::in::MinimalTIFFReader | virtual
getMetadataOptions() const | ome::files::detail::FormatReader | virtual
getMetadataOptions() | ome::files::detail::FormatReader | virtual
getMetadataStore() const | ome::files::detail::FormatReader | virtual
getMetadataStore() | ome::files::detail::FormatReader | virtual
getMetadataValue(const std::string &field) const | ome::files::detail::FormatReader | virtual
getModuloC() | ome::files::detail::FormatReader | virtual
getModuloC() const | ome::files::detail::FormatReader | virtual
getModuloT() | ome::files::detail::FormatReader | virtual
getModuloT() const | ome::files::detail::FormatReader | virtual
getModuloZ() | ome::files::detail::FormatReader | virtual
getModuloZ() const | ome::files::detail::FormatReader | virtual
getOptimalTileHeight(dimension_size_type channel) const | ome::files::detail::FormatReader | virtual
getOptimalTileHeight() const | ome::files::detail::FormatReader | virtual
getOptimalTileWidth(dimension_size_type channel) const | ome::files::detail::FormatReader | virtual
getOptimalTileWidth() const | ome::files::detail::FormatReader | virtual
getPixelType() const | ome::files::detail::FormatReader | virtual
getPlane() const | ome::files::detail::FormatReader | virtual
getPossibleDomains(const std::string &id) const | ome::files::detail::FormatReader | virtual
getRequiredDirectories(const std::vector< std::string > &files) const | ome::files::detail::FormatReader | virtual
getResolution() const | ome::files::detail::FormatReader | virtual
getResolutionCount() const | ome::files::detail::FormatReader | virtual
getRGBChannelCount(dimension_size_type channel) const | ome::files::detail::FormatReader | virtual
getSeries() const | ome::files::detail::FormatReader | virtual
getSeriesCount() const | ome::files::detail::FormatReader | virtual
getSeriesMetadata() const | ome::files::detail::FormatReader | virtual
getSeriesMetadataValue(const MetadataMap::key_type &field) const | ome::files::detail::FormatReader | virtual
getSeriesUsedFiles(bool noPixels=false) const | ome::files::detail::FormatReader | virtual
getSizeC() const | ome::files::detail::FormatReader | virtual
getSizeT() const | ome::files::detail::FormatReader | virtual
getSizeX() const | ome::files::detail::FormatReader | virtual
getSizeY() const | ome::files::detail::FormatReader | virtual
getSizeZ() const | ome::files::detail::FormatReader | virtual
getSuffixes() const | ome::files::detail::FormatReader | virtual
getSupportedMetadataLevels() | ome::files::detail::FormatReader | virtual
getThumbSize() const | ome::files::detail::FormatReader | protected
getThumbSizeX() const | ome::files::detail::FormatReader | virtual
getThumbSizeY() const | ome::files::detail::FormatReader | virtual
getTIFF() | ome::files::in::MinimalTIFFReader |
getTIFF() const | ome::files::in::MinimalTIFFReader |
getUnderlyingReaders() const | ome::files::detail::FormatReader | virtual
getUsedFiles(bool noPixels=false) const | ome::files::detail::FormatReader | virtual
getZCTCoords(dimension_size_type index) const | ome::files::detail::FormatReader | virtual
getZCTModuloCoords(dimension_size_type index) const | ome::files::detail::FormatReader | virtual
group | ome::files::detail::FormatReader | protected
hasCompanionFiles() const | ome::files::detail::FormatReader | virtual
hasFlattenedResolutions() const | ome::files::detail::FormatReader | virtual
ifdAtIndex(dimension_size_type plane) const | ome::files::in::MinimalTIFFReader | protected
ijmeta | ome::files::in::TIFFReader | protected
in | ome::files::detail::FormatReader | protected
indexedAsRGB | ome::files::detail::FormatReader | protected
initFile(const boost::filesystem::path &id) | ome::files::in::MinimalTIFFReader | protected virtual
isFalseColor() const | ome::files::detail::FormatReader | virtual
isFilenameThisTypeImpl(const boost::filesystem::path &name) const | ome::files::in::MinimalTIFFReader | protected virtual
isGroupFiles() const | ome::files::detail::FormatReader | virtual
isIndexed() const | ome::files::detail::FormatReader | virtual
isInterleaved() const | ome::files::detail::FormatReader | virtual
isInterleaved(dimension_size_type subC) const | ome::files::detail::FormatReader | virtual
isLittleEndian() const | ome::files::detail::FormatReader | virtual
isMetadataComplete() const | ome::files::detail::FormatReader | virtual
isMetadataFiltered() const | ome::files::detail::FormatReader | virtual
isNormalized() const | ome::files::detail::FormatReader | virtual
isOrderCertain() const | ome::files::detail::FormatReader | virtual
isOriginalMetadataPopulated() const | ome::files::detail::FormatReader | virtual
isRGB(dimension_size_type channel) const | ome::files::detail::FormatReader | virtual
isSingleFile(const boost::filesystem::path &id) const | ome::files::detail::FormatReader | virtual
isStreamThisTypeImpl(std::istream &stream) const | ome::files::detail::FormatReader | protected virtual
isThisType(const boost::filesystem::path &name, bool open=true) const | ome::files::detail::FormatReader | virtual
isThisType(const uint8_t *begin, std::size_t length) const | ome::files::detail::FormatReader | virtual
isThisType(const uint8_t *begin, const uint8_t *end) const | ome::files::detail::FormatReader | virtual
isThisType(std::istream &stream) const | ome::files::detail::FormatReader | virtual
isThumbnailSeries() const | ome::files::detail::FormatReader | virtual
isUsedFile(const boost::filesystem::path &file) | ome::files::detail::FormatReader | protected virtual
makeFilterMetadata() | ome::files::detail::FormatReader | protected virtual
metadata | ome::files::detail::FormatReader | protected
MetadataConfigurable() | ome::files::MetadataConfigurable | protected
metadataOptions | ome::files::detail::FormatReader | protected
metadataStore | ome::files::detail::FormatReader | protected
MinimalTIFFReader() | ome::files::in::MinimalTIFFReader |
MinimalTIFFReader(const ome::files::detail::ReaderProperties &readerProperties) | ome::files::in::MinimalTIFFReader |
MUST_GROUP enum value | ome::files::FormatReader |
normalizeData | ome::files::detail::FormatReader | protected
openBytes(dimension_size_type plane, VariantPixelBuffer &buf) const | ome::files::detail::FormatReader | virtual
openBytes(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) const | ome::files::detail::FormatReader | virtual
openBytesImpl(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) const | ome::files::in::MinimalTIFFReader | protected virtual
openThumbBytes(dimension_size_type plane, VariantPixelBuffer &buf) const | ome::files::detail::FormatReader | virtual
plane | ome::files::detail::FormatReader | mutable protected
readerProperties | ome::files::detail::FormatReader | protected
readIFDs() | ome::files::in::TIFFReader | protected virtual
readPlane(std::istream &source, VariantPixelBuffer &dest, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h, dimension_size_type samples) | ome::files::detail::FormatReader | protected virtual
readPlane(std::istream &source, VariantPixelBuffer &dest, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h, dimension_size_type scanlinePad, dimension_size_type samples) | ome::files::detail::FormatReader | protected virtual
resolution | ome::files::detail::FormatReader | mutable protected
saveOriginalMetadata | ome::files::detail::FormatReader | protected
series | ome::files::detail::FormatReader | mutable protected
seriesIFDRange | ome::files::in::MinimalTIFFReader | protected
seriesToCoreIndex(dimension_size_type series) const | ome::files::detail::FormatReader | virtual
setCoreIndex(dimension_size_type index) const | ome::files::detail::FormatReader | virtual
setFlattenedResolutions(bool flatten) | ome::files::detail::FormatReader | virtual
setGroupFiles(bool group) | ome::files::detail::FormatReader | virtual
setId(const boost::filesystem::path &id) | ome::files::detail::FormatReader | virtual
setMetadataFiltered(bool filter) | ome::files::detail::FormatReader | virtual
setMetadataOptions(const MetadataOptions &options) | ome::files::detail::FormatReader | virtual
setMetadataStore(ome::compat::shared_ptr< ::ome::xml::meta::MetadataStore > &store) | ome::files::detail::FormatReader | virtual
setNormalized(bool normalize) | ome::files::detail::FormatReader | virtual
setOriginalMetadataPopulated(bool populate) | ome::files::detail::FormatReader | virtual
setPlane(dimension_size_type plane) const | ome::files::detail::FormatReader | virtual
setResolution(dimension_size_type resolution) const | ome::files::detail::FormatReader | virtual
setSeries(dimension_size_type series) const | ome::files::detail::FormatReader | virtual
suffixNecessary | ome::files::detail::FormatReader | protected
suffixSufficient | ome::files::detail::FormatReader | protected
tiff | ome::files::in::MinimalTIFFReader | protected
TIFFReader() | ome::files::in::TIFFReader |
~FormatHandler() | ome::files::FormatHandler | inline virtual
~FormatReader() | ome::files::detail::FormatReader | virtual
~MetadataConfigurable() | ome::files::MetadataConfigurable | virtual
~MinimalTIFFReader() | ome::files::in::MinimalTIFFReader | virtual
~TIFFReader() | ome::files::in::TIFFReader | virtual