## Uses of Interface
loci.formats.ome.OMEXMLMetadata

- Packages that use OMEXMLMetadata
  Package | Description
  --- | ---
  loci.formats.in | Package containing Bio-Formats file format readers.
  loci.formats.meta | Package containing core Bio-Formats metadata interfaces for the OME data model.
  loci.formats.out | Package containing Bio-Formats file format writers.
  loci.formats.services |

- - ### Uses of OMEXMLMetadata in loci.formats.in

    Fields in loci.formats.in declared as OMEXMLMetadata
    Modifier and Type | Field and Description
    --- | ---
    `private OMEXMLMetadata` | OMETiffReader.`meta`
    `private OMEXMLMetadata` | OBFReader.`ome_meta_data`
    `private OMEXMLMetadata` | FakeReader.`omeXmlMetadata`

    Methods in loci.formats.in that return OMEXMLMetadata
    Modifier and Type | Method and Description
    --- | ---
    `OMEXMLMetadata` | FakeReader.`getOmeXmlMetadata()`

  - ### Uses of OMEXMLMetadata in loci.formats.meta

    Methods in loci.formats.meta with parameters of type OMEXMLMetadata
    Modifier and Type | Method and Description
    --- | ---
    `void` | ModuloAnnotation.`setModulo(OMEXMLMetadata meta, Modulo m)` Set the value of this annotation using the given Modulo object

  - ### Uses of OMEXMLMetadata in loci.formats.out

    Fields in loci.formats.out declared as OMEXMLMetadata
    Modifier and Type | Field and Description
    --- | ---
    `private OMEXMLMetadata` | OMETiffWriter.`omeMeta`

    Methods in loci.formats.out with parameters of type OMEXMLMetadata
    Modifier and Type | Method and Description
    --- | ---
    `private void` | OMETiffWriter.`populateImage(OMEXMLMetadata omeMeta, int series)`
    `private void` | OMETiffWriter.`populateTiffData(OMEXMLMetadata omeMeta, int[] zct, int ifd, int series, int plane)`

  - ### Uses of OMEXMLMetadata in loci.formats.services

    Methods in loci.formats.services that return OMEXMLMetadata
    Modifier and Type | Method and Description
    --- | ---
    `OMEXMLMetadata` | OMEXMLServiceImpl.`createOMEXMLMetadata()`
    `OMEXMLMetadata` | OMEXMLService.`createOMEXMLMetadata()` Creates an OME-XML metadata object using reflection, to avoid direct dependencies on the optional `loci.formats.ome` package.
    `OMEXMLMetadata` | OMEXMLServiceImpl.`createOMEXMLMetadata(java.lang.String xml)`
    `OMEXMLMetadata` | OMEXMLService.`createOMEXMLMetadata(java.lang.String xml)` Creates an OME-XML metadata object using reflection, to avoid direct dependencies on the optional `loci.formats.ome` package, wrapping a DOM representation of the given OME-XML string.
    `OMEXMLMetadata` | OMEXMLServiceImpl.`createOMEXMLMetadata(java.lang.String xml, java.lang.String version)`
    `OMEXMLMetadata` | OMEXMLService.`createOMEXMLMetadata(java.lang.String xml, java.lang.String version)` Creates an OME-XML metadata object using reflection, to avoid direct dependencies on the optional `loci.formats.ome` package, wrapping a DOM representation of the given OME-XML string.
    `OMEXMLMetadata` | OMEXMLServiceImpl.`getOMEMetadata(MetadataRetrieve src)`
    `OMEXMLMetadata` | OMEXMLService.`getOMEMetadata(MetadataRetrieve src)` Returns a `OMEXMLMetadata` object with the same contents as the given MetadataRetrieve, converting it if necessary.

    Methods in loci.formats.services with parameters of type OMEXMLMetadata
    Modifier and Type | Method and Description
    --- | ---
    `void` | OMEXMLServiceImpl.`addMetadataOnly(OMEXMLMetadata omexmlMeta, int image)`
    `void` | OMEXMLService.`addMetadataOnly(OMEXMLMetadata omexmlMeta, int image)` Insert a MetadataOnly element under the Image specified by 'index' in the given OME-XML metadata object.
    `void` | OMEXMLServiceImpl.`addMetadataOnly(OMEXMLMetadata omexmlMeta, int image, boolean resolve)`
    `void` | OMEXMLService.`addMetadataOnly(OMEXMLMetadata omexmlMeta, int image, boolean resolve)` Insert a MetadataOnly element under the Image specified by 'index' in the given OME-XML metadata object.
    `void` | OMEXMLServiceImpl.`addModuloAlong(OMEXMLMetadata meta, CoreMetadata core, int imageIdx)`
    `void` | OMEXMLService.`addModuloAlong(OMEXMLMetadata omexmlMeta, CoreMetadata core, int image)` Adds ModuloAlong* annotations to the given OME-XML metadata object, using the given CoreMetadata object to determine modulo dimensions.
    `private void` | OMEXMLServiceImpl.`createModulo(OMEXMLMetadata meta, Modulo modulo, ome.xml.model.StructuredAnnotations annotations, ome.xml.model.Image image, int imageIdx, int annotationIndex, int imageAnnotation)` Create a ModuloAlong* annotation corresponding to the given `Modulo`.
    `private Modulo` | OMEXMLServiceImpl.`getModuloAlong(OMEXMLMetadata omexml, java.lang.String tag, int image)` Create a `Modulo` corresponding to the given ModuloAlong* tag.
    `Modulo` | OMEXMLServiceImpl.`getModuloAlongC(OMEXMLMetadata omexml, int image)`
    `Modulo` | OMEXMLService.`getModuloAlongC(OMEXMLMetadata omexmlMeta, int image)` Retrieve the ModuloAlongC annotation in the given Image in the given OME-XML metadata object.
    `Modulo` | OMEXMLServiceImpl.`getModuloAlongT(OMEXMLMetadata omexml, int image)`
    `Modulo` | OMEXMLService.`getModuloAlongT(OMEXMLMetadata omexmlMeta, int image)` Retrieve the ModuloAlongT annotation in the given Image in the given OME-XML metadata object.
    `Modulo` | OMEXMLServiceImpl.`getModuloAlongZ(OMEXMLMetadata omexml, int image)`
    `Modulo` | OMEXMLService.`getModuloAlongZ(OMEXMLMetadata omexmlMeta, int image)` Retrieve the ModuloAlongZ annotation in the given Image in the given OME-XML metadata object.
    `java.util.Hashtable` | OMEXMLServiceImpl.`getOriginalMetadata(OMEXMLMetadata omexmlMeta)`
    `java.util.Hashtable` | OMEXMLService.`getOriginalMetadata(OMEXMLMetadata omexmlMeta)` Parse any OriginalMetadata annotations from the given OME-XML metadata object and store them in a Hashtable.
    `boolean` | OMEXMLServiceImpl.`isEqual(OMEXMLMetadata src1, OMEXMLMetadata src2)`
    `boolean` | OMEXMLService.`isEqual(OMEXMLMetadata src1, OMEXMLMetadata src2)` Determine whether or not two OMEXMLMetadata objects are equal.
    `void` | OMEXMLServiceImpl.`populateOriginalMetadata(OMEXMLMetadata omexmlMeta, java.util.Hashtable<java.lang.String,java.lang.Object> metadata)`
    `void` | OMEXMLService.`populateOriginalMetadata(OMEXMLMetadata omexmlMeta, java.util.Hashtable<java.lang.String,java.lang.Object> metadata)` Adds the key/value pairs in the specified Hashtable as new OriginalMetadata annotations in the given OME-XML metadata object.
    `void` | OMEXMLServiceImpl.`populateOriginalMetadata(OMEXMLMetadata omexmlMeta, java.lang.String key, java.lang.String value)`
    `void` | OMEXMLService.`populateOriginalMetadata(OMEXMLMetadata omexmlMeta, java.lang.String key, java.lang.String value)` Adds the specified key/value pair as a new OriginalMetadata node to the given OME-XML metadata object.
    `void` | OMEXMLServiceImpl.`removeBinData(OMEXMLMetadata omexmlMeta)`
    `void` | OMEXMLService.`removeBinData(OMEXMLMetadata omexmlMeta)` Remove all of the BinData elements from the given OME-XML metadata object.
    `void` | OMEXMLServiceImpl.`removeChannels(OMEXMLMetadata omexmlMeta, int image, int sizeC)`
    `void` | OMEXMLService.`removeChannels(OMEXMLMetadata omexmlMeta, int image, int sizeC)` Remove all but the first sizeC valid Channel elements from the given OME-XML metadata object.
    `void` | OMEXMLServiceImpl.`removeTiffData(OMEXMLMetadata omexmlMeta)`
    `void` | OMEXMLService.`removeTiffData(OMEXMLMetadata omexmlMeta)` Remove all of the TiffData elements from the given OME-XML metadata object.

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