Bio-Formats 5.3.1 Downloads
Tools | API | Components | Code | Previous versions
-
Full documentation is available to read on the web or to download as zipped html.
-
Internet Explorer sometimes renames JAR files to ZIP (e.g., bioformats_package.jar becomes bioformats_package.zip); if this happens to you, simply rename the file back to its original name after the download is complete.
-
For some browsers, you may need to right-click or control-click the link and choose "Save link as..." or a similar option to download the file.
Bio-Formats tools downloads
Client | Size | File Name | Checksum |
---|---|---|---|
31.59 MB | bioformats_package.jar | ce1ae9fc (SHA1) | |
29.92 MB | bftools.zip | f1055dab (SHA1) | |
29.91 MB | bfmatlab.zip | a6403ae3 (SHA1) | |
34.4 KB | bioformats-octave-5.3.1.tar.gz | ddad1431 (SHA1) |
-
bioformats_package.jar is the complete bundle (for end users) containing everything needed to read images into ImageJ using Bio-Formats. Instructions for installing Bio-Formats in ImageJ are available in the user guide.
-
bftools.zip is a bundle of scripts for using Bio-Formats on the command line with bioformats_package.jar included so you do not have to install both separately. See the command line tools documentation for further information.
-
bfmatlab.zip is a bundle of functions for using Bio-Formats from MATLAB with bioformats_package.jar included so you do not have to install both separately. See the MATLAB documentation for further information.
-
bioformats-octave-5.3.1.tar.gz is a bundle of functions for using Bio-Formats from Octave. You also need to install bioformats_package.jar separately. See the Octave documentation for further information.
Bio-Formats API documentation
API Documentation | Size | File Name | SHA1 Checksum |
---|---|---|---|
8.49 MB | bio-formats-javadocs-5.3.1.zip | cef9a426 (SHA1) |
-
The Bio-Formats API documentation is also available to read on the web here.
Bio-Formats components downloads
Project | 5.3.1 |
---|---|
Package | |
Bio-Formats package | bioformats_package.jar |
LOCI Tools | loci_tools.jar |
Core | |
Bio-Formats API library | formats-api.jar |
Bio-Formats BSD library | formats-bsd.jar |
Bio-Formats GPL library | formats-gpl.jar |
Bio-Formats Plugins for ImageJ | bio-formats_plugins.jar |
Bio-Formats testing framework | bio-formats-testing-framework.jar |
Fork | |
JAI Image I/O Tools | jai_imageio.jar |
TurboJPEG | turbojpeg.jar |
Source code
Source Code | Size | File Name | Checksum |
---|---|---|---|
9.12 MB | bioformats-5.3.1.tar.xz | c1a22053 (SHA1) | |
12.62 MB | bioformats-5.3.1.zip | baa7bd8c (SHA1) |
Previous versions
-
Previous versions of Bio-Formats can be found on the Bio-Formats archive page.