bioformats  5.1.8
Channel.h
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38 
39 /*─────────────────────────────────────────────────────────────────────────────
40  *
41  * THIS IS AUTOMATICALLY GENERATED CODE. DO NOT MODIFY.
42  *
43  *─────────────────────────────────────────────────────────────────────────────
44  */
45 
46 #ifndef OME_XML_MODEL_CHANNEL_H
47 #define OME_XML_MODEL_CHANNEL_H
48 
49 #include <algorithm>
50 #include <list>
51 #include <stdexcept>
52 #include <string>
53 #include <vector>
54 
55 #include <ome/common/log.h>
56 
57 #include <ome/common/xml/dom/Document.h>
58 #include <ome/common/xml/dom/Element.h>
59 #include <ome/common/xml/dom/Node.h>
60 #include <ome/common/xml/dom/NodeList.h>
61 
62 #include <ome/xml/model/DetectorSettings.h>
63 #include <ome/xml/model/FilterSet.h>
64 #include <ome/xml/model/LightPath.h>
65 #include <ome/xml/model/LightSourceSettings.h>
66 #include <ome/xml/model/Pixels.h>
67 #include <ome/xml/model/detail/OMEModelObject.h>
68 #include <ome/xml/model/enums/AcquisitionMode.h>
69 #include <ome/xml/model/enums/ContrastMethod.h>
70 #include <ome/xml/model/enums/IlluminationType.h>
71 #include <ome/xml/model/primitives/Color.h>
72 #include <ome/xml/model/primitives/PositiveInteger.h>
73 
74 namespace ome
75 {
76  namespace xml
77  {
78  namespace model
79  {
80 
81  // Forward declarations.
82  class Annotation;
83  class OMEModel;
84 
89  {
90  private:
91  class Impl;
93  ome::compat::shared_ptr<Impl> impl;
94 
95  public:
97  Channel();
98 
104  Channel (const Channel& copy);
105 
107  virtual
108  ~Channel ();
109 
124  static ome::compat::shared_ptr< Channel>
125  create(const common::xml::dom::Element& element,
127 
128  // Documented in superclass.
129  const std::string&
130  elementName() const;
131 
132  // Documented in superclass.
133  bool
134  validElementName(const std::string& name) const;
135 
136 
137  // -- OMEModelObject API methods --
138 
140  virtual void
141  update(const common::xml::dom::Element& element,
143 
144  public:
145  // -- Channel API methods --
146 
148  bool
149  link (ome::compat::shared_ptr<Reference>& reference,
150  ome::compat::shared_ptr< ome::xml::model::OMEModelObject>& object);
151 
157  ome::compat::shared_ptr<double>
158  getPinholeSize ();
159 
165  const ome::compat::shared_ptr<double>
166  getPinholeSize () const;
167 
173  void
174  setPinholeSize (ome::compat::shared_ptr<double>& pinholeSize);
175 
181  ome::compat::shared_ptr<std::string>
182  getName ();
183 
189  const ome::compat::shared_ptr<std::string>
190  getName () const;
191 
197  void
198  setName (ome::compat::shared_ptr<std::string>& name);
199 
205  ome::compat::shared_ptr<ome::xml::model::enums::AcquisitionMode>
207 
213  const ome::compat::shared_ptr<ome::xml::model::enums::AcquisitionMode>
214  getAcquisitionMode () const;
215 
221  void
222  setAcquisitionMode (ome::compat::shared_ptr<ome::xml::model::enums::AcquisitionMode>& acquisitionMode);
223 
229  ome::compat::shared_ptr<ome::xml::model::primitives::Color>
230  getColor ();
231 
237  const ome::compat::shared_ptr<ome::xml::model::primitives::Color>
238  getColor () const;
239 
245  void
246  setColor (ome::compat::shared_ptr<ome::xml::model::primitives::Color>& color);
247 
253  ome::compat::shared_ptr<ome::xml::model::enums::ContrastMethod>
255 
261  const ome::compat::shared_ptr<ome::xml::model::enums::ContrastMethod>
262  getContrastMethod () const;
263 
269  void
270  setContrastMethod (ome::compat::shared_ptr<ome::xml::model::enums::ContrastMethod>& contrastMethod);
271 
277  ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
279 
285  const ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
286  getExcitationWavelength () const;
287 
293  void
294  setExcitationWavelength (ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>& excitationWavelength);
295 
301  ome::compat::shared_ptr<ome::xml::model::enums::IlluminationType>
303 
309  const ome::compat::shared_ptr<ome::xml::model::enums::IlluminationType>
310  getIlluminationType () const;
311 
317  void
318  setIlluminationType (ome::compat::shared_ptr<ome::xml::model::enums::IlluminationType>& illuminationType);
319 
325  ome::compat::shared_ptr<std::string>
326  getFluor ();
327 
333  const ome::compat::shared_ptr<std::string>
334  getFluor () const;
335 
341  void
342  setFluor (ome::compat::shared_ptr<std::string>& fluor);
343 
349  ome::compat::shared_ptr<int32_t>
351 
357  const ome::compat::shared_ptr<int32_t>
358  getPockelCellSetting () const;
359 
365  void
366  setPockelCellSetting (ome::compat::shared_ptr<int32_t>& pockelCellSetting);
367 
373  ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
375 
381  const ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
382  getEmissionWavelength () const;
383 
389  void
390  setEmissionWavelength (ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>& emissionWavelength);
391 
397  ome::compat::shared_ptr<double>
398  getNDFilter ();
399 
405  const ome::compat::shared_ptr<double>
406  getNDFilter () const;
407 
413  void
414  setNDFilter (ome::compat::shared_ptr<double>& ndFilter);
415 
421  const std::string&
422  getID () const;
423 
429  void
430  setID (const std::string& id);
431 
437  ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
439 
445  const ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
446  getSamplesPerPixel () const;
447 
453  void
454  setSamplesPerPixel (ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>& samplesPerPixel);
455 
461  ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>
463 
469  const ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>
470  getLightSourceSettings () const;
471 
477  void
478  setLightSourceSettings (ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>& lightSourceSettings);
479 
485  ome::compat::shared_ptr<ome::xml::model::DetectorSettings>
487 
493  const ome::compat::shared_ptr<ome::xml::model::DetectorSettings>
494  getDetectorSettings () const;
495 
501  void
502  setDetectorSettings (ome::compat::shared_ptr<ome::xml::model::DetectorSettings>& detectorSettings);
503 
510  ome::compat::weak_ptr<ome::xml::model::FilterSet>
512 
519  const ome::compat::weak_ptr<ome::xml::model::FilterSet>
520  getLinkedFilterSet () const;
521 
527  void
528  linkFilterSet (ome::compat::shared_ptr<ome::xml::model::FilterSet>& filterSet);
529 
539  void
540  unlinkFilterSet (ome::compat::shared_ptr<ome::xml::model::FilterSet>& filterSet);
541 
549 
556  getLinkedAnnotationList () const;
557 
565  const ome::compat::weak_ptr<ome::xml::model::Annotation>&
567 
578  const ome::compat::weak_ptr<ome::xml::model::Annotation>&
580  const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);
581 
592  bool
593  linkAnnotation (const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);
594 
610  bool
611  unlinkAnnotation (const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);
612 
618  ome::compat::shared_ptr<ome::xml::model::LightPath>
619  getLightPath ();
620 
626  const ome::compat::shared_ptr<ome::xml::model::LightPath>
627  getLightPath () const;
628 
634  void
635  setLightPath (ome::compat::shared_ptr<ome::xml::model::LightPath>& lightPath);
636 
642  ome::compat::weak_ptr<ome::xml::model::Pixels>
643  getPixels ();
644 
650  const ome::compat::weak_ptr<ome::xml::model::Pixels>
651  getPixels () const;
652 
658  void
659  setPixels (ome::compat::weak_ptr<ome::xml::model::Pixels>& pixels_BackReference);
660 
661 
664  asXMLElement (common::xml::dom::Document& document) const;
665 
666 
667  protected:
668  // Documented in base class.
671  common::xml::dom::Element& element) const;
672 
673  public:
674  // Documented in superclass.
675  const std::string&
676  getXMLNamespace() const;
677  };
678 
679  }
680  }
681 }
682 
683 #endif // OME_XML_MODEL_CHANNEL_H
684 
685 /*
686  * Local Variables:
687  * mode:C++
688  * End:
689  */
OME model interface (abstract top-level container)
Definition: OMEModel.h:62
void setDetectorSettings(ome::compat::shared_ptr< ome::xml::model::DetectorSettings > &detectorSettings)
Set the DetectorSettings property.
Definition: Channel.cpp:850
ome::compat::shared_ptr< std::string > getFluor()
Get the Fluor property.
Definition: Channel.cpp:696
ome::compat::shared_ptr< ome::xml::model::primitives::PositiveInteger > getSamplesPerPixel()
Get the SamplesPerPixel property.
Definition: Channel.cpp:794
void setColor(ome::compat::shared_ptr< ome::xml::model::primitives::Color > &color)
Set the Color property.
Definition: Channel.cpp:626
ome::compat::shared_ptr< ome::xml::model::enums::ContrastMethod > getContrastMethod()
Get the ContrastMethod property.
Definition: Channel.cpp:633
Channel()
Default constructor.
Definition: Channel.cpp:257
void linkFilterSet(ome::compat::shared_ptr< ome::xml::model::FilterSet > &filterSet)
Link FilterSet.
Definition: Channel.cpp:870
ome::compat::shared_ptr< std::string > getName()
Get the Name property.
Definition: Channel.cpp:570
const std::string & getXMLNamespace() const
Get the XML namespace for this model object.
Definition: Channel.cpp:1230
ome::compat::shared_ptr< Impl > impl
Private implementation details.
Definition: Channel.h:91
virtual void update(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Update the object hierarchy recursively from an XML DOM tree.
Definition: Channel.cpp:306
ome::compat::weak_ptr< ome::xml::model::Pixels > getPixels()
Get the Pixels property.
Definition: Channel.cpp:967
void setSamplesPerPixel(ome::compat::shared_ptr< ome::xml::model::primitives::PositiveInteger > &samplesPerPixel)
Set the SamplesPerPixel property.
Definition: Channel.cpp:808
virtual ~Channel()
Destructor.
Definition: Channel.cpp:276
bool validElementName(const std::string &name) const
Check if a given element name is valid for processing by this model object.
Definition: Channel.cpp:297
DOM Document wrapper.
Definition: Document.h:83
DOM Element wrapper.
Definition: Element.h:66
OME model object (concrete implementation).
Definition: OMEModelObject.h:64
OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type getLinkedAnnotationList() const
Get the linked Annotation list.
Definition: Channel.cpp:892
boost::multi_index_container< Ptr< T >, boost::multi_index::indexed_by< boost::multi_index::random_access<>, boost::multi_index::ordered_unique< boost::multi_index::identity< Ptr< T > >, ome::compat::owner_less< Ptr< T > > > > > type
Multi-index container type.
Definition: OMEModelObject.h:94
Channel model object.
Definition: Channel.h:88
const ome::compat::weak_ptr< ome::xml::model::Annotation > & getLinkedAnnotation(OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type::size_type index) const
Get linked Annotation.
Definition: Channel.cpp:898
const std::string & getID() const
Get the ID property.
Definition: Channel.cpp:780
void setNDFilter(ome::compat::shared_ptr< double > &ndFilter)
Set the NDFilter property.
Definition: Channel.cpp:773
ome::compat::shared_ptr< double > getPinholeSize()
Get the PinholeSize property.
Definition: Channel.cpp:549
void setFluor(ome::compat::shared_ptr< std::string > &fluor)
Set the Fluor property.
Definition: Channel.cpp:710
ome::compat::shared_ptr< ome::xml::model::primitives::PositiveInteger > getExcitationWavelength()
Get the ExcitationWavelength property.
Definition: Channel.cpp:654
void setContrastMethod(ome::compat::shared_ptr< ome::xml::model::enums::ContrastMethod > &contrastMethod)
Set the ContrastMethod property.
Definition: Channel.cpp:647
void setLightPath(ome::compat::shared_ptr< ome::xml::model::LightPath > &lightPath)
Set the LightPath property.
Definition: Channel.cpp:960
Multi-index container for efficient ordered insertion and deletion of model object references...
Definition: OMEModelObject.h:85
ome::compat::shared_ptr< ome::xml::model::primitives::PositiveInteger > getEmissionWavelength()
Get the EmissionWavelength property.
Definition: Channel.cpp:738
bool linkAnnotation(const ome::compat::shared_ptr< ome::xml::model::Annotation > &annotation)
Link Annotation.
Definition: Channel.cpp:914
Open Microscopy Environment C++ implementation.
Definition: CoreMetadata.cpp:40
ome::compat::shared_ptr< ome::xml::model::enums::AcquisitionMode > getAcquisitionMode()
Get the AcquisitionMode property.
Definition: Channel.cpp:591
Private implementation details of Channel model object.
Definition: Channel.cpp:91
void setEmissionWavelength(ome::compat::shared_ptr< ome::xml::model::primitives::PositiveInteger > &emissionWavelength)
Set the EmissionWavelength property.
Definition: Channel.cpp:752
ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > getLightSourceSettings()
Get the LightSourceSettings property.
Definition: Channel.cpp:815
void setName(ome::compat::shared_ptr< std::string > &name)
Set the Name property.
Definition: Channel.cpp:584
ome::compat::shared_ptr< double > getNDFilter()
Get the NDFilter property.
Definition: Channel.cpp:759
const ome::compat::weak_ptr< ome::xml::model::Annotation > & setLinkedAnnotation(OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Annotation > &annotation)
Set linked Annotation.
Definition: Channel.cpp:904
void setExcitationWavelength(ome::compat::shared_ptr< ome::xml::model::primitives::PositiveInteger > &excitationWavelength)
Set the ExcitationWavelength property.
Definition: Channel.cpp:668
ome::compat::shared_ptr< ome::xml::model::enums::IlluminationType > getIlluminationType()
Get the IlluminationType property.
Definition: Channel.cpp:675
ome::compat::shared_ptr< ome::xml::model::DetectorSettings > getDetectorSettings()
Get the DetectorSettings property.
Definition: Channel.cpp:836
void setLightSourceSettings(ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > &lightSourceSettings)
Set the LightSourceSettings property.
Definition: Channel.cpp:829
virtual common::xml::dom::Element asXMLElement(common::xml::dom::Document &document) const
Transform the object hierarchy rooted at this element to XML.
Definition: Channel.cpp:988
ome::compat::shared_ptr< int32_t > getPockelCellSetting()
Get the PockelCellSetting property.
Definition: Channel.cpp:717
ome::compat::shared_ptr< ome::xml::model::LightPath > getLightPath()
Get the LightPath property.
Definition: Channel.cpp:946
bool link(ome::compat::shared_ptr< Reference > &reference, ome::compat::shared_ptr< ome::xml::model::OMEModelObject > &object)
Link a given OME model object to this model object.
Definition: Channel.cpp:507
OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type::size_type sizeOfLinkedAnnotationList() const
Get size of linked Annotation list.
Definition: Channel.cpp:886
void setPockelCellSetting(ome::compat::shared_ptr< int32_t > &pockelCellSetting)
Set the PockelCellSetting property.
Definition: Channel.cpp:731
void unlinkFilterSet(ome::compat::shared_ptr< ome::xml::model::FilterSet > &filterSet)
Unlink FilterSet.
Definition: Channel.cpp:876
void setPixels(ome::compat::weak_ptr< ome::xml::model::Pixels > &pixels_BackReference)
Set the Pixels property.
Definition: Channel.cpp:981
void setID(const std::string &id)
Set the ID property.
Definition: Channel.cpp:787
void setIlluminationType(ome::compat::shared_ptr< ome::xml::model::enums::IlluminationType > &illuminationType)
Set the IlluminationType property.
Definition: Channel.cpp:689
static ome::compat::shared_ptr< Channel > create(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Create a Channel model object from DOM element.
Definition: Channel.cpp:281
Boost.Log compatibility.
ome::compat::shared_ptr< ome::xml::model::primitives::Color > getColor()
Get the Color property.
Definition: Channel.cpp:612
ome::compat::weak_ptr< ome::xml::model::FilterSet > getLinkedFilterSet()
Get linked FilterSet.
Definition: Channel.cpp:857
bool unlinkAnnotation(const ome::compat::shared_ptr< ome::xml::model::Annotation > &annotation)
Unlink Annotation.
Definition: Channel.cpp:928
virtual common::xml::dom::Element asXMLElementInternal(common::xml::dom::Document &document, common::xml::dom::Element &element) const
Transform the object hierarchy rooted at this element to XML.
Definition: Channel.cpp:995
const std::string & elementName() const
Get the element name of this model object.
Definition: Channel.cpp:290
void setAcquisitionMode(ome::compat::shared_ptr< ome::xml::model::enums::AcquisitionMode > &acquisitionMode)
Set the AcquisitionMode property.
Definition: Channel.cpp:605
void setPinholeSize(ome::compat::shared_ptr< double > &pinholeSize)
Set the PinholeSize property.
Definition: Channel.cpp:563
Xerces-C modern C++ wrapper.
Definition: Base.h:53