Bio-Formats

Main Downloads
C++ Downloads
Licensing

Previous topic

Using Bio-Formats in MATLAB

Next topic

Interfacing with Bio-Formats from non-Java code

This Page

Note

This documentation is for the new Bio-Formats 5.1 version. See the latest Bio-Formats 5.0.x version or the previous versions page to find documentation for the version you are using.

Using Bio-Formats in PythonΒΆ

OME does not currently provide a Python implementation for Bio-Formats.

The CellProfiler project has implemented a Python wrapper around Bio-Formats used by the CellProfiler software which can be installed using pip:

pip install python-bioformats

See also

https://pypi.python.org/pypi/python-bioformats
Source code of the CellProfiler Python wrapper for Bio-Formats