bioformats  5.1.2
ome::bioformats::in::MinimalTIFFReader Member List

This is the complete list of members for ome::bioformats::in::MinimalTIFFReader, including all inherited members.

ome::assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true)ome::bioformats::FormatHandlerinlinestatic
ome::bioformats::FormatHandler::assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true)ome::bioformats::FormatHandlerinlinestatic
CAN_GROUP enum valueome::bioformats::FormatReader
CANNOT_GROUP enum valueome::bioformats::FormatReader
ome::checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix)ome::bioformats::FormatHandlerinlinestatic
ome::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes)ome::bioformats::FormatHandlerinlinestatic
ome::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes)ome::bioformats::FormatHandlerinlinestatic
ome::bioformats::FormatHandler::checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix)ome::bioformats::FormatHandlerinlinestatic
ome::bioformats::FormatHandler::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes)ome::bioformats::FormatHandlerinlinestatic
ome::bioformats::FormatHandler::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes)ome::bioformats::FormatHandlerinlinestatic
close(bool fileOnly=false)ome::bioformats::in::MinimalTIFFReadervirtual
companionFilesome::bioformats::detail::FormatReaderprotected
coreome::bioformats::detail::FormatReaderprotected
coreIndexome::bioformats::detail::FormatReadermutableprotected
coreIndexToSeries(dimension_size_type index) const ome::bioformats::detail::FormatReadervirtual
coremetadata_list_type typedefome::bioformats::detail::FormatReaderprotected
currentIdome::bioformats::detail::FormatReaderprotected
datasetDescriptionome::bioformats::detail::FormatReaderprotected
domainsome::bioformats::detail::FormatReaderprotected
fileGroupOption(const std::string &id)ome::bioformats::detail::FormatReadervirtual
FileGroupOption enum nameome::bioformats::FormatReader
filterMetadataome::bioformats::detail::FormatReaderprotected
flattenedResolutionsome::bioformats::detail::FormatReaderprotected
ome::FormatHandler()ome::bioformats::FormatHandlerinlineprotected
ome::bioformats::FormatHandler::FormatHandler()ome::bioformats::FormatHandlerinlineprotected
FormatReader(const ReaderProperties &)ome::bioformats::detail::FormatReaderprotected
ome::bioformats::FormatReader::FormatReader()ome::bioformats::FormatReaderinlineprotected
getAdvancedSeriesUsedFiles(bool noPixels=false) const ome::bioformats::detail::FormatReadervirtual
getAdvancedUsedFiles(bool noPixels=false) const ome::bioformats::detail::FormatReadervirtual
getBitsPerPixel() const ome::bioformats::detail::FormatReadervirtual
getCompressionSuffixes() const ome::bioformats::detail::FormatReadervirtual
getCoreIndex() const ome::bioformats::detail::FormatReadervirtual
getCoreMetadata(dimension_size_type index) const ome::bioformats::detail::FormatReaderinlineprotected
getCoreMetadata(dimension_size_type index)ome::bioformats::detail::FormatReaderinlineprotected
getCoreMetadataList() const ome::bioformats::detail::FormatReadervirtual
getCurrentFile() const ome::bioformats::detail::FormatReadervirtual
getDatasetStructureDescription() const ome::bioformats::detail::FormatReadervirtual
getDimensionOrder() const ome::bioformats::detail::FormatReadervirtual
getDomains() const ome::bioformats::detail::FormatReadervirtual
getEffectiveSizeC() const ome::bioformats::detail::FormatReadervirtual
getFormat() const ome::bioformats::detail::FormatReadervirtual
getFormatDescription() const ome::bioformats::detail::FormatReadervirtual
getGlobalMetadata() const ome::bioformats::detail::FormatReadervirtual
getImageCount() const ome::bioformats::detail::FormatReadervirtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t) const ome::bioformats::detail::FormatReadervirtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t, dimension_size_type moduloZ, dimension_size_type moduloC, dimension_size_type moduloT) const ome::bioformats::detail::FormatReadervirtual
getLookupTable(dimension_size_type plane, VariantPixelBuffer &buf) const ome::bioformats::in::MinimalTIFFReadervirtual
getMetadataOptions() const ome::bioformats::detail::FormatReadervirtual
getMetadataOptions()ome::bioformats::detail::FormatReadervirtual
getMetadataStore() const ome::bioformats::detail::FormatReadervirtual
getMetadataStore()ome::bioformats::detail::FormatReadervirtual
getMetadataValue(const std::string &field) const ome::bioformats::detail::FormatReadervirtual
getModuloC()ome::bioformats::detail::FormatReadervirtual
getModuloC() const ome::bioformats::detail::FormatReadervirtual
getModuloT()ome::bioformats::detail::FormatReadervirtual
getModuloT() const ome::bioformats::detail::FormatReadervirtual
getModuloZ()ome::bioformats::detail::FormatReadervirtual
getModuloZ() const ome::bioformats::detail::FormatReadervirtual
getOptimalTileHeight(dimension_size_type channel) const ome::bioformats::detail::FormatReadervirtual
getOptimalTileHeight() const ome::bioformats::detail::FormatReadervirtual
getOptimalTileWidth(dimension_size_type channel) const ome::bioformats::detail::FormatReadervirtual
getOptimalTileWidth() const ome::bioformats::detail::FormatReadervirtual
getPixelType() const ome::bioformats::detail::FormatReadervirtual
getPossibleDomains(const std::string &id) const ome::bioformats::detail::FormatReadervirtual
getRequiredDirectories(const std::vector< std::string > &files) const ome::bioformats::detail::FormatReadervirtual
getResolution() const ome::bioformats::detail::FormatReadervirtual
getResolutionCount() const ome::bioformats::detail::FormatReadervirtual
getRGBChannelCount(dimension_size_type channel) const ome::bioformats::detail::FormatReadervirtual
getSeries() const ome::bioformats::detail::FormatReadervirtual
getSeriesCount() const ome::bioformats::detail::FormatReadervirtual
getSeriesMetadata() const ome::bioformats::detail::FormatReadervirtual
getSeriesMetadataValue(const MetadataMap::key_type &field) const ome::bioformats::detail::FormatReadervirtual
getSeriesUsedFiles(bool noPixels=false) const ome::bioformats::detail::FormatReadervirtual
getSizeC() const ome::bioformats::detail::FormatReadervirtual
getSizeT() const ome::bioformats::detail::FormatReadervirtual
getSizeX() const ome::bioformats::detail::FormatReadervirtual
getSizeY() const ome::bioformats::detail::FormatReadervirtual
getSizeZ() const ome::bioformats::detail::FormatReadervirtual
getSuffixes() const ome::bioformats::detail::FormatReadervirtual
getSupportedMetadataLevels()ome::bioformats::detail::FormatReadervirtual
getThumbSize() const ome::bioformats::detail::FormatReaderprotected
getThumbSizeX() const ome::bioformats::detail::FormatReadervirtual
getThumbSizeY() const ome::bioformats::detail::FormatReadervirtual
getTIFF()ome::bioformats::in::MinimalTIFFReader
getTIFF() const ome::bioformats::in::MinimalTIFFReader
getUnderlyingReaders() const ome::bioformats::detail::FormatReadervirtual
getUsedFiles(bool noPixels=false) const ome::bioformats::detail::FormatReadervirtual
getZCTCoords(dimension_size_type index) const ome::bioformats::detail::FormatReadervirtual
getZCTModuloCoords(dimension_size_type index) const ome::bioformats::detail::FormatReadervirtual
groupome::bioformats::detail::FormatReaderprotected
hasCompanionFiles() const ome::bioformats::detail::FormatReadervirtual
hasFlattenedResolutions() const ome::bioformats::detail::FormatReadervirtual
ifdAtIndex(dimension_size_type plane) const ome::bioformats::in::MinimalTIFFReaderprotected
inome::bioformats::detail::FormatReaderprotected
indexedAsRGBome::bioformats::detail::FormatReaderprotected
initFile(const boost::filesystem::path &id)ome::bioformats::in::MinimalTIFFReaderprotectedvirtual
isFalseColor() const ome::bioformats::detail::FormatReadervirtual
isFilenameThisTypeImpl(const boost::filesystem::path &name) const ome::bioformats::in::MinimalTIFFReaderprotectedvirtual
isGroupFiles() const ome::bioformats::detail::FormatReadervirtual
isIndexed() const ome::bioformats::detail::FormatReadervirtual
isInterleaved() const ome::bioformats::detail::FormatReadervirtual
isInterleaved(dimension_size_type subC) const ome::bioformats::detail::FormatReadervirtual
isLittleEndian() const ome::bioformats::detail::FormatReadervirtual
isMetadataComplete() const ome::bioformats::detail::FormatReadervirtual
isMetadataFiltered() const ome::bioformats::detail::FormatReadervirtual
isNormalized() const ome::bioformats::detail::FormatReadervirtual
isOrderCertain() const ome::bioformats::detail::FormatReadervirtual
isOriginalMetadataPopulated() const ome::bioformats::detail::FormatReadervirtual
isRGB(dimension_size_type channel) const ome::bioformats::detail::FormatReadervirtual
isSingleFile(const boost::filesystem::path &id) const ome::bioformats::detail::FormatReadervirtual
isStreamThisTypeImpl(std::istream &stream) const ome::bioformats::detail::FormatReaderprotectedvirtual
isThisType(const boost::filesystem::path &name, bool open=true) const ome::bioformats::detail::FormatReadervirtual
isThisType(const uint8_t *begin, std::size_t length) const ome::bioformats::detail::FormatReadervirtual
isThisType(const uint8_t *begin, const uint8_t *end) const ome::bioformats::detail::FormatReadervirtual
isThisType(std::istream &stream) const ome::bioformats::detail::FormatReadervirtual
isThumbnailSeries() const ome::bioformats::detail::FormatReadervirtual
isUsedFile(const boost::filesystem::path &file)ome::bioformats::detail::FormatReaderprotectedvirtual
makeFilterMetadata()ome::bioformats::detail::FormatReaderprotectedvirtual
metadataome::bioformats::detail::FormatReaderprotected
MetadataConfigurable()ome::bioformats::MetadataConfigurableprotected
metadataOptionsome::bioformats::detail::FormatReaderprotected
metadataStoreome::bioformats::detail::FormatReaderprotected
MinimalTIFFReader()ome::bioformats::in::MinimalTIFFReader
MinimalTIFFReader(const ome::bioformats::detail::ReaderProperties &readerProperties)ome::bioformats::in::MinimalTIFFReader
MUST_GROUP enum valueome::bioformats::FormatReader
normalizeDataome::bioformats::detail::FormatReaderprotected
openBytes(dimension_size_type plane, VariantPixelBuffer &buf) const ome::bioformats::detail::FormatReadervirtual
openBytes(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) const ome::bioformats::detail::FormatReadervirtual
openBytesImpl(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) const ome::bioformats::in::MinimalTIFFReaderprotectedvirtual
openThumbBytes(dimension_size_type plane, VariantPixelBuffer &buf) const ome::bioformats::detail::FormatReadervirtual
readerPropertiesome::bioformats::detail::FormatReaderprotected
readIFDs()ome::bioformats::in::MinimalTIFFReaderprotectedvirtual
readPlane(std::istream &source, VariantPixelBuffer &dest, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h, dimension_size_type samples)ome::bioformats::detail::FormatReaderprotectedvirtual
readPlane(std::istream &source, VariantPixelBuffer &dest, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h, dimension_size_type scanlinePad, dimension_size_type samples)ome::bioformats::detail::FormatReaderprotectedvirtual
resolutionome::bioformats::detail::FormatReadermutableprotected
saveOriginalMetadataome::bioformats::detail::FormatReaderprotected
seriesome::bioformats::detail::FormatReadermutableprotected
seriesIFDRangeome::bioformats::in::MinimalTIFFReaderprotected
seriesToCoreIndex(dimension_size_type series) const ome::bioformats::detail::FormatReadervirtual
setCoreIndex(dimension_size_type index) const ome::bioformats::detail::FormatReadervirtual
setFlattenedResolutions(bool flatten)ome::bioformats::detail::FormatReadervirtual
setGroupFiles(bool group)ome::bioformats::detail::FormatReadervirtual
setId(const boost::filesystem::path &id)ome::bioformats::detail::FormatReadervirtual
setMetadataFiltered(bool filter)ome::bioformats::detail::FormatReadervirtual
setMetadataOptions(const MetadataOptions &options)ome::bioformats::detail::FormatReadervirtual
setMetadataStore(ome::compat::shared_ptr< ::ome::xml::meta::MetadataStore > &store)ome::bioformats::detail::FormatReadervirtual
setNormalized(bool normalize)ome::bioformats::detail::FormatReadervirtual
setOriginalMetadataPopulated(bool populate)ome::bioformats::detail::FormatReadervirtual
setResolution(dimension_size_type resolution) const ome::bioformats::detail::FormatReadervirtual
setSeries(dimension_size_type series) const ome::bioformats::detail::FormatReadervirtual
suffixNecessaryome::bioformats::detail::FormatReaderprotected
suffixSufficientome::bioformats::detail::FormatReaderprotected
tiffome::bioformats::in::MinimalTIFFReaderprotected
~FormatHandler()ome::bioformats::FormatHandlerinlinevirtual
~FormatReader()ome::bioformats::detail::FormatReadervirtual
~MetadataConfigurable()ome::bioformats::MetadataConfigurablevirtual
~MinimalTIFFReader()ome::bioformats::in::MinimalTIFFReadervirtual