46 #ifndef OME_XML_MODEL_MICROBEAMMANIPULATION_H
47 #define OME_XML_MODEL_MICROBEAMMANIPULATION_H
57 #include <ome/common/xml/dom/Document.h>
58 #include <ome/common/xml/dom/Element.h>
59 #include <ome/common/xml/dom/Node.h>
60 #include <ome/common/xml/dom/NodeList.h>
62 #include <ome/xml/model/Experiment.h>
63 #include <ome/xml/model/Experimenter.h>
64 #include <ome/xml/model/detail/OMEModelObject.h>
65 #include <ome/xml/model/enums/MicrobeamManipulationType.h>
76 class LightSourceSettings;
87 ome::compat::shared_ptr<ome::xml::model::enums::MicrobeamManipulationType>
type;
101 ome::compat::weak_ptr<ome::xml::model::Experiment>
experiment;
134 static ome::compat::shared_ptr< MicrobeamManipulation>
159 link (ome::compat::shared_ptr<Reference>& reference,
160 ome::compat::shared_ptr< ome::xml::model::OMEModelObject>&
object);
167 ome::compat::shared_ptr<ome::xml::model::enums::MicrobeamManipulationType>
175 const ome::compat::shared_ptr<ome::xml::model::enums::MicrobeamManipulationType>
184 setType (ome::compat::shared_ptr<ome::xml::model::enums::MicrobeamManipulationType>& type);
200 setID (
const std::string&
id);
207 ome::compat::shared_ptr<std::string>
215 const ome::compat::shared_ptr<std::string>
224 setDescription (ome::compat::shared_ptr<std::string>& description);
249 const ome::compat::weak_ptr<ome::xml::model::ROI>&
262 const ome::compat::weak_ptr<ome::xml::model::ROI>&
264 const ome::compat::shared_ptr<ome::xml::model::ROI>& roi);
277 linkROI (
const ome::compat::shared_ptr<ome::xml::model::ROI>& roi);
295 unlinkROI (
const ome::compat::shared_ptr<ome::xml::model::ROI>& roi);
303 ome::compat::weak_ptr<ome::xml::model::Experimenter>
312 const ome::compat::weak_ptr<ome::xml::model::Experimenter>
321 linkExperimenter (ome::compat::shared_ptr<ome::xml::model::Experimenter>& experimenter);
333 unlinkExperimenter (ome::compat::shared_ptr<ome::xml::model::Experimenter>& experimenter);
340 std::vector<ome::compat::shared_ptr<ome::xml::model::LightSourceSettings> >::size_type
349 std::vector<ome::compat::shared_ptr<ome::xml::model::LightSourceSettings> >&
358 const std::vector<ome::compat::shared_ptr<ome::xml::model::LightSourceSettings> >&
368 ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>&
369 getLightSourceSettings (std::vector<ome::compat::shared_ptr<ome::xml::model::LightSourceSettings> >::size_type index);
378 const ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>&
379 getLightSourceSettings (std::vector<ome::compat::shared_ptr<ome::xml::model::LightSourceSettings> >::size_type index)
const;
389 setLightSourceSettings (std::vector<ome::compat::shared_ptr<ome::xml::model::LightSourceSettings> >::size_type index,
390 ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>& lightSourceSettings);
401 addLightSourceSettings (ome::compat::shared_ptr<ome::xml::model::LightSourceSettings>& lightSourceSettings);
438 const ome::compat::weak_ptr<ome::xml::model::Image>&
451 const ome::compat::weak_ptr<ome::xml::model::Image>&
453 const ome::compat::shared_ptr<ome::xml::model::Image>& image_BackReference);
466 linkImage (
const ome::compat::shared_ptr<ome::xml::model::Image>& image_BackReference);
484 unlinkImage (
const ome::compat::shared_ptr<ome::xml::model::Image>& image_BackReference);
491 ome::compat::weak_ptr<ome::xml::model::Experiment>
499 const ome::compat::weak_ptr<ome::xml::model::Experiment>
508 setExperiment (ome::compat::weak_ptr<ome::xml::model::Experiment>& experiment_BackReference);
532 #endif // OME_XML_MODEL_MICROBEAMMANIPULATION_H
OME model interface (abstract top-level container)
Definition: OMEModel.h:62
ome::compat::weak_ptr< ome::xml::model::Experiment > getExperiment()
Get the Experiment property.
Definition: MicrobeamManipulation.cpp:576
ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > & getLightSourceSettings(std::vector< ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > >::size_type index)
Get LightSourceSettings.
Definition: MicrobeamManipulation.cpp:478
ome::compat::weak_ptr< ome::xml::model::Experimenter > experimenter
ExperimenterRef reference.
Definition: MicrobeamManipulation.h:95
ome::compat::shared_ptr< ome::xml::model::enums::MicrobeamManipulationType > type
Type property.
Definition: MicrobeamManipulation.h:87
bool linkROI(const ome::compat::shared_ptr< ome::xml::model::ROI > &roi)
Link ROI.
Definition: MicrobeamManipulation.cpp:399
void setExperiment(ome::compat::weak_ptr< ome::xml::model::Experiment > &experiment_BackReference)
Set the Experiment property.
Definition: MicrobeamManipulation.cpp:590
std::vector< ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > > & getLightSourceSettingsList()
Get the LightSourceSettings list.
Definition: MicrobeamManipulation.cpp:466
const std::string & getID() const
Get the ID property.
Definition: MicrobeamManipulation.cpp:336
void unlinkExperimenter(ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Unlink Experimenter.
Definition: MicrobeamManipulation.cpp:450
DOM Document wrapper.
Definition: Document.h:82
const ome::compat::weak_ptr< ome::xml::model::ROI > & setLinkedROI(OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::ROI > &roi)
Set linked ROI.
Definition: MicrobeamManipulation.cpp:389
DOM Element wrapper.
Definition: Element.h:66
virtual common::xml::dom::Element asXMLElementInternal(common::xml::dom::Document &document, common::xml::dom::Element &element) const
Transform the object hierarchy rooted at this element to XML.
Definition: MicrobeamManipulation.cpp:604
OME model object (concrete implementation).
Definition: OMEModelObject.h:64
boost::multi_index_container< Ptr< T >, boost::multi_index::indexed_by< boost::multi_index::random_access<>, boost::multi_index::ordered_unique< boost::multi_index::identity< Ptr< T > >, ome::compat::owner_less< Ptr< T > > > > > type
Multi-index container type.
Definition: OMEModelObject.h:94
void removeLightSourceSettings(ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > &lightSourceSettings)
Remove LightSourceSettings.
Definition: MicrobeamManipulation.cpp:507
virtual ~MicrobeamManipulation()
Destructor.
Definition: MicrobeamManipulation.cpp:158
ome::compat::shared_ptr< ome::xml::model::enums::MicrobeamManipulationType > getType()
Get the Type property.
Definition: MicrobeamManipulation.cpp:315
std::vector< ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > > lightSourceSettingsCombinations
LightSourceSettings property (occurs more than once)
Definition: MicrobeamManipulation.h:97
const ome::compat::weak_ptr< ome::xml::model::ROI > & getLinkedROI(OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type::size_type index) const
Get linked ROI.
Definition: MicrobeamManipulation.cpp:383
Multi-index container for efficient ordered insertion and deletion of model object references...
Definition: OMEModelObject.h:85
std::string id
ID property.
Definition: MicrobeamManipulation.h:89
bool link(ome::compat::shared_ptr< Reference > &reference, ome::compat::shared_ptr< ome::xml::model::OMEModelObject > &object)
Link a given OME model object to this model object.
Definition: MicrobeamManipulation.cpp:273
Open Microscopy Environment C++ implementation.
Definition: CoreMetadata.cpp:40
bool unlinkROI(const ome::compat::shared_ptr< ome::xml::model::ROI > &roi)
Unlink ROI.
Definition: MicrobeamManipulation.cpp:413
bool validElementName(const std::string &name) const
Check if a given element name is valid for processing by this model object.
Definition: MicrobeamManipulation.cpp:179
bool unlinkImage(const ome::compat::shared_ptr< ome::xml::model::Image > &image_BackReference)
Unlink Image.
Definition: MicrobeamManipulation.cpp:559
ome::compat::weak_ptr< ome::xml::model::Experimenter > getLinkedExperimenter()
Get linked Experimenter.
Definition: MicrobeamManipulation.cpp:431
MicrobeamManipulation()
Default constructor.
Definition: MicrobeamManipulation.cpp:125
ome::compat::weak_ptr< ome::xml::model::Experiment > experiment
Experiment_BackReference back reference.
Definition: MicrobeamManipulation.h:101
ome::compat::shared_ptr< std::string > description
Description property.
Definition: MicrobeamManipulation.h:91
MicrobeamManipulation model object.
Definition: MicrobeamManipulation.h:83
const ome::compat::weak_ptr< ome::xml::model::Image > & setLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Image > &image_BackReference)
Set linked Image.
Definition: MicrobeamManipulation.cpp:536
std::vector< ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > >::size_type sizeOfLightSourceSettingsList() const
Get size of linked LightSourceSettings list.
Definition: MicrobeamManipulation.cpp:460
const std::string & elementName() const
Get the element name of this model object.
Definition: MicrobeamManipulation.cpp:172
OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type getLinkedROIList() const
Get the linked ROI list.
Definition: MicrobeamManipulation.cpp:377
void addLightSourceSettings(ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > &lightSourceSettings)
Add LightSourceSettings.
Definition: MicrobeamManipulation.cpp:499
virtual common::xml::dom::Element asXMLElement(common::xml::dom::Document &document) const
Transform the object hierarchy rooted at this element to XML.
Definition: MicrobeamManipulation.cpp:597
OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type roiLinks
ROIRef reference (occurs more than once)
Definition: MicrobeamManipulation.h:93
const std::string & getXMLNamespace() const
Get the XML namespace for this model object.
Definition: MicrobeamManipulation.cpp:713
static ome::compat::shared_ptr< MicrobeamManipulation > create(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Create a MicrobeamManipulation model object from DOM element.
Definition: MicrobeamManipulation.cpp:163
OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type getLinkedImageList() const
Get the linked Image list.
Definition: MicrobeamManipulation.cpp:524
void setType(ome::compat::shared_ptr< ome::xml::model::enums::MicrobeamManipulationType > &type)
Set the Type property.
Definition: MicrobeamManipulation.cpp:329
OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type::size_type sizeOfLinkedImageList() const
Get size of linked Image list.
Definition: MicrobeamManipulation.cpp:518
const ome::compat::weak_ptr< ome::xml::model::Image > & getLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type::size_type index) const
Get linked Image.
Definition: MicrobeamManipulation.cpp:530
OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type imageLinks
Image_BackReference back reference (occurs more than once)
Definition: MicrobeamManipulation.h:99
void setLightSourceSettings(std::vector< ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > >::size_type index, ome::compat::shared_ptr< ome::xml::model::LightSourceSettings > &lightSourceSettings)
Set LightSourceSettings.
Definition: MicrobeamManipulation.cpp:490
OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type::size_type sizeOfLinkedROIList() const
Get size of linked ROI list.
Definition: MicrobeamManipulation.cpp:371
void setDescription(ome::compat::shared_ptr< std::string > &description)
Set the Description property.
Definition: MicrobeamManipulation.cpp:364
virtual void update(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Update the object hierarchy recursively from an XML DOM tree.
Definition: MicrobeamManipulation.cpp:188
void setID(const std::string &id)
Set the ID property.
Definition: MicrobeamManipulation.cpp:343
bool linkImage(const ome::compat::shared_ptr< ome::xml::model::Image > &image_BackReference)
Link Image.
Definition: MicrobeamManipulation.cpp:546
void linkExperimenter(ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Link Experimenter.
Definition: MicrobeamManipulation.cpp:444
Xerces-C modern C++ wrapper.
Definition: Base.h:53
ome::compat::shared_ptr< std::string > getDescription()
Get the Description property.
Definition: MicrobeamManipulation.cpp:350