Note

This documentation is for the new Bio-Formats 5.1 version. See the latest Bio-Formats 5.0.x version or the previous versions page to find documentation for the version you are using.

Summary of supported metadata fields

Format readers

You can sort this table by clicking on any of the headings.

Format	Supported	Unsupported	Partial	Unknown/Missing
AFIReader	30	0	0	445
AIMReader	22	0	0	453
APLReader	21	0	0	454
APNGReader	19	0	0	456
ARFReader	19	0	0	456
AVIReader	19	0	0	456
AliconaReader	33	0	0	442
AmiraReader	22	0	0	453
AnalyzeReader	24	0	0	451
BDReader	57	0	0	418
BIFormatReader	19	0	0	456
BMPReader	21	0	0	454
BaseTiffReader	28	0	0	447
BaseZeissReader	83	0	0	392
BioRadGelReader	21	0	0	454
BioRadReader	40	0	0	435
BioRadSCNReader	29	0	0	446
BrukerReader	23	0	0	452
BurleighReader	22	0	0	453
CanonRawReader	19	0	0	456
CellH5Reader	31	0	0	444
CellSensReader	46	0	0	429
CellVoyagerReader	34	0	0	441
CellWorxReader	45	0	0	430
CellomicsReader	31	0	0	444
DNGReader	19	0	0	456
DeltavisionReader	52	0	0	423
DicomReader	23	0	0	452
EPSReader	19	0	0	456
Ecat7Reader	23	0	0	452
FEIReader	19	0	0	456
FEITiffReader	39	0	0	436
FV1000Reader	113	0	0	362
FakeReader	49	0	0	426
FilePatternReader	19	0	0	456
FitsReader	19	0	0	456
FlexReader	69	0	0	406
FlowSightReader	20	0	0	455
FluoviewReader	49	0	0	426
FujiReader	23	0	0	452
GIFReader	19	0	0	456
GatanDM2Reader	30	0	0	445
GatanReader	36	0	0	439
GelReader	21	0	0	454
HISReader	27	0	0	448
HRDGDFReader	21	0	0	454
HamamatsuVMSReader	26	0	0	449
HitachiReader	31	0	0	444
I2IReader	19	0	0	456
ICSReader	72	0	0	403
IM3Reader	19	0	0	456
IMODReader	44	0	0	431
INRReader	22	0	0	453
IPLabReader	31	0	0	444
IPWReader	20	0	0	455
ImaconReader	23	0	0	452
ImageIOReader	19	0	0	456
ImagicReader	22	0	0	453
ImarisHDFReader	23	0	0	452
ImarisReader	32	0	0	443
ImarisTiffReader	23	0	0	452
ImprovisionTiffReader	25	0	0	450
ImspectorReader	19	0	0	456
InCell3000Reader	19	0	0	456
InCellReader	67	0	0	408
InveonReader	30	0	0	445
IvisionReader	34	0	0	441
JEOLReader	19	0	0	456
JPEG2000Reader	19	0	0	456
JPEGReader	19	0	0	456
JPKReader	19	0	0	456
JPXReader	19	0	0	456
KhorosReader	19	0	0	456
KodakReader	26	0	0	449
L2DReader	29	0	0	446
LEOReader	27	0	0	448
LIFReader	85	0	0	390
LIMReader	19	0	0	456
LegacyND2Reader	19	0	0	456
LegacyQTReader	19	0	0	456
LeicaReader	56	0	0	419
LeicaSCNReader	33	0	0	442
LiFlimReader	25	0	0	450
MIASReader	64	0	0	411
MINCReader	23	0	0	452
MNGReader	19	0	0	456
MRCReader	22	0	0	453
MRWReader	19	0	0	456
MetamorphReader	46	0	0	429
MetamorphTiffReader	38	0	0	437
MicromanagerReader	38	0	0	437
MinimalTiffReader	19	0	0	456
MolecularImagingReader	21	0	0	454
NAFReader	19	0	0	456
ND2Reader	19	0	0	456
NDPIReader	28	0	0	447
NDPISReader	19	0	0	456
NRRDReader	22	0	0	453
NativeND2Reader	52	0	0	423
NativeQTReader	19	0	0	456
NiftiReader	24	0	0	451
NikonElementsTiffReader	50	0	0	425
NikonReader	19	0	0	456
NikonTiffReader	47	0	0	428
OBFReader	19	0	0	456
OMETiffReader	19	0	0	456
OMEXMLReader	19	0	0	456
OpenlabRawReader	19	0	0	456
OpenlabReader	32	0	0	443
OperettaReader	43	0	0	432
OxfordInstrumentsReader	22	0	0	453
PCIReader	29	0	0	446
PCORAWReader	26	0	0	449
PCXReader	19	0	0	456
PDSReader	23	0	0	452
PGMReader	19	0	0	456
PQBinReader	21	0	0	454
PSDReader	19	0	0	456
PerkinElmerReader	30	0	0	445
PhotoshopTiffReader	19	0	0	456
PictReader	19	0	0	456
PovrayReader	19	0	0	456
PrairieReader	46	0	0	429
PyramidTiffReader	19	0	0	456
QTReader	19	0	0	456
QuesantReader	22	0	0	453
RHKReader	22	0	0	453
SBIGReader	22	0	0	453
SDTReader	19	0	0	456
SEQReader	19	0	0	456
SIFReader	20	0	0	455
SISReader	33	0	0	442
SMCameraReader	19	0	0	456
SVSReader	29	0	0	446
ScanrReader	43	0	0	432
ScreenReader	34	0	0	441
SeikoReader	22	0	0	453
SimplePCITiffReader	33	0	0	442
SlidebookReader	34	0	0	441
SlidebookTiffReader	30	0	0	445
SpiderReader	21	0	0	454
TCSReader	22	0	0	453
TargaReader	20	0	0	455
TextReader	19	0	0	456
TiffDelegateReader	19	0	0	456
TiffJAIReader	19	0	0	456
TiffReader	22	0	0	453
TileJPEGReader	19	0	0	456
TillVisionReader	22	0	0	453
TopometrixReader	22	0	0	453
TrestleReader	26	0	0	449
UBMReader	19	0	0	456
UnisokuReader	22	0	0	453
VGSAMReader	19	0	0	456
VarianFDFReader	25	0	0	450
VeecoReader	19	0	0	456
VisitechReader	19	0	0	456
VolocityClippingReader	19	0	0	456
VolocityReader	38	0	0	437
WATOPReader	22	0	0	453
WlzReader	26	0	0	449
ZeissCZIReader	158	0	0	317
ZeissLMSReader	23	0	0	452
ZeissLSMReader	101	0	0	374
ZeissTIFFReader	19	0	0	456
ZeissZVIReader	19	0	0	456
ZipReader	19	0	0	456

Metadata fields

You can sort this table by clicking on any of the headings.

Field	Supported	Unsupported	Partial	Unknown/Missing
Arc - ID	0	0	0	167
Arc - LotNumber	1	0	0	166
Arc - Manufacturer	1	0	0	166
Arc - Model	1	0	0	166
Arc - Power	1	0	0	166
Arc - SerialNumber	1	0	0	166
Arc - Type	0	0	0	167
BooleanAnnotation - AnnotationRef	0	0	0	167
BooleanAnnotation - Description	0	0	0	167
BooleanAnnotation - ID	1	0	0	166
BooleanAnnotation - Namespace	1	0	0	166
BooleanAnnotation - Value	1	0	0	166
Channel - AcquisitionMode	4	0	0	163
Channel - AnnotationRef	0	0	0	167
Channel - Color	8	0	0	159
Channel - ContrastMethod	0	0	0	167
Channel - EmissionWavelength	18	0	0	149
Channel - ExcitationWavelength	17	0	0	150
Channel - FilterSetRef	1	0	0	166
Channel - Fluor	1	0	0	166
Channel - ID	167	0	0	0
Channel - IlluminationType	3	0	0	164
Channel - LightSourceSettingsAttenuation	1	0	0	166
Channel - LightSourceSettingsID	5	0	0	162
Channel - LightSourceSettingsWavelength	2	0	0	165
Channel - NDFilter	2	0	0	165
Channel - Name	33	0	0	134
Channel - PinholeSize	10	0	0	157
Channel - PockelCellSetting	0	0	0	167
Channel - SamplesPerPixel	167	0	0	0
CommentAnnotation - AnnotationRef	0	0	0	167
CommentAnnotation - Description	0	0	0	167
CommentAnnotation - ID	1	0	0	166
CommentAnnotation - Namespace	1	0	0	166
CommentAnnotation - Value	1	0	0	166
Dataset - AnnotationRef	0	0	0	167
Dataset - Description	0	0	0	167
Dataset - ExperimenterGroupRef	0	0	0	167
Dataset - ExperimenterRef	0	0	0	167
Dataset - ID	0	0	0	167
Dataset - ImageRef	0	0	0	167
Dataset - Name	0	0	0	167
Detector - AmplificationGain	2	0	0	165
Detector - Gain	6	0	0	161
Detector - ID	35	0	0	132
Detector - LotNumber	1	0	0	166
Detector - Manufacturer	5	0	0	162
Detector - Model	14	0	0	153
Detector - Offset	6	0	0	161
Detector - SerialNumber	4	0	0	163
Detector - Type	28	0	0	139
Detector - Voltage	2	0	0	165
Detector - Zoom	4	0	0	163
DetectorSettings - Binning	18	0	0	149
DetectorSettings - Gain	20	0	0	147
DetectorSettings - ID	33	0	0	134
DetectorSettings - Offset	9	0	0	158
DetectorSettings - ReadOutRate	5	0	0	162
DetectorSettings - Voltage	6	0	0	161
Dichroic - ID	6	0	0	161
Dichroic - LotNumber	1	0	0	166
Dichroic - Manufacturer	1	0	0	166
Dichroic - Model	6	0	0	161
Dichroic - SerialNumber	1	0	0	166
DoubleAnnotation - AnnotationRef	0	0	0	167
DoubleAnnotation - Description	0	0	0	167
DoubleAnnotation - ID	1	0	0	166
DoubleAnnotation - Namespace	1	0	0	166
DoubleAnnotation - Value	1	0	0	166
Ellipse - FillColor	0	0	0	167
Ellipse - FillRule	0	0	0	167
Ellipse - FontFamily	0	0	0	167
Ellipse - FontSize	2	0	0	165
Ellipse - FontStyle	0	0	0	167
Ellipse - ID	5	0	0	162
Ellipse - LineCap	0	0	0	167
Ellipse - Locked	0	0	0	167
Ellipse - RadiusX	5	0	0	162
Ellipse - RadiusY	5	0	0	162
Ellipse - StrokeColor	0	0	0	167
Ellipse - StrokeDashArray	0	0	0	167
Ellipse - StrokeWidth	2	0	0	165
Ellipse - Text	3	0	0	164
Ellipse - TheC	0	0	0	167
Ellipse - TheT	2	0	0	165
Ellipse - TheZ	2	0	0	165
Ellipse - Transform	2	0	0	165
Ellipse - Visible	0	0	0	167
Ellipse - X	5	0	0	162
Ellipse - Y	5	0	0	162
Experiment - Description	1	0	0	166
Experiment - ExperimenterRef	0	0	0	167
Experiment - ID	5	0	0	162
Experiment - Type	5	0	0	162
Experimenter - AnnotationRef	0	0	0	167
Experimenter - Email	2	0	0	165
Experimenter - FirstName	5	0	0	162
Experimenter - ID	11	0	0	156
Experimenter - Institution	4	0	0	163
Experimenter - LastName	9	0	0	158
Experimenter - MiddleName	1	0	0	166
Experimenter - UserName	3	0	0	164
ExperimenterGroup - AnnotationRef	0	0	0	167
ExperimenterGroup - Description	0	0	0	167
ExperimenterGroup - ExperimenterRef	0	0	0	167
ExperimenterGroup - ID	0	0	0	167
ExperimenterGroup - Leader	0	0	0	167
ExperimenterGroup - Name	0	0	0	167
Filament - ID	0	0	0	167
Filament - LotNumber	1	0	0	166
Filament - Manufacturer	1	0	0	166
Filament - Model	1	0	0	166
Filament - Power	1	0	0	166
Filament - SerialNumber	1	0	0	166
Filament - Type	0	0	0	167
FileAnnotation - AnnotationRef	0	0	0	167
FileAnnotation - Description	0	0	0	167
FileAnnotation - ID	0	0	0	167
FileAnnotation - Namespace	0	0	0	167
Filter - FilterWheel	2	0	0	165
Filter - ID	8	0	0	159
Filter - LotNumber	1	0	0	166
Filter - Manufacturer	1	0	0	166
Filter - Model	8	0	0	159
Filter - SerialNumber	1	0	0	166
Filter - Type	2	0	0	165
FilterSet - DichroicRef	2	0	0	165
FilterSet - EmissionFilterRef	2	0	0	165
FilterSet - ExcitationFilterRef	2	0	0	165
FilterSet - ID	2	0	0	165
FilterSet - LotNumber	1	0	0	166
FilterSet - Manufacturer	1	0	0	166
FilterSet - Model	2	0	0	165
FilterSet - SerialNumber	1	0	0	166
Image - AcquisitionDate	167	0	0	0
Image - AnnotationRef	1	0	0	166
Image - Description	44	0	0	123
Image - ExperimentRef	2	0	0	165
Image - ExperimenterGroupRef	0	0	0	167
Image - ExperimenterRef	6	0	0	161
Image - ID	167	0	0	0
Image - InstrumentRef	45	0	0	122
Image - MicrobeamManipulationRef	0	0	0	167
Image - Name	167	0	0	0
Image - ROIRef	12	0	0	155
ImagingEnvironment - AirPressure	1	0	0	166
ImagingEnvironment - CO2Percent	1	0	0	166
ImagingEnvironment - Humidity	1	0	0	166
ImagingEnvironment - Temperature	10	0	0	157
Instrument - ID	51	0	0	116
Label - FillColor	0	0	0	167
Label - FillRule	0	0	0	167
Label - FontFamily	0	0	0	167
Label - FontSize	2	0	0	165
Label - FontStyle	0	0	0	167
Label - ID	3	0	0	164
Label - LineCap	0	0	0	167
Label - Locked	0	0	0	167
Label - StrokeColor	0	0	0	167
Label - StrokeDashArray	0	0	0	167
Label - StrokeWidth	2	0	0	165
Label - Text	3	0	0	164
Label - TheC	0	0	0	167
Label - TheT	0	0	0	167
Label - TheZ	0	0	0	167
Label - Transform	0	0	0	167
Label - Visible	0	0	0	167
Label - X	3	0	0	164
Label - Y	3	0	0	164
Laser - FrequencyMultiplication	0	0	0	167
Laser - ID	9	0	0	158
Laser - LaserMedium	8	0	0	159
Laser - LotNumber	1	0	0	166
Laser - Manufacturer	2	0	0	165
Laser - Model	4	0	0	163
Laser - PockelCell	0	0	0	167
Laser - Power	3	0	0	164
Laser - Pulse	0	0	0	167
Laser - Pump	0	0	0	167
Laser - RepetitionRate	1	0	0	166
Laser - SerialNumber	1	0	0	166
Laser - Tuneable	0	0	0	167
Laser - Type	8	0	0	159
Laser - Wavelength	7	0	0	160
LightEmittingDiode - ID	0	0	0	167
LightEmittingDiode - LotNumber	1	0	0	166
LightEmittingDiode - Manufacturer	1	0	0	166
LightEmittingDiode - Model	1	0	0	166
LightEmittingDiode - Power	1	0	0	166
LightEmittingDiode - SerialNumber	1	0	0	166
LightPath - DichroicRef	3	0	0	164
LightPath - EmissionFilterRef	5	0	0	162
LightPath - ExcitationFilterRef	1	0	0	166
Line - FillColor	0	0	0	167
Line - FillRule	0	0	0	167
Line - FontFamily	0	0	0	167
Line - FontSize	2	0	0	165
Line - FontStyle	0	0	0	167
Line - ID	5	0	0	162
Line - LineCap	0	0	0	167
Line - Locked	0	0	0	167
Line - MarkerEnd	0	0	0	167
Line - MarkerStart	0	0	0	167
Line - StrokeColor	0	0	0	167
Line - StrokeDashArray	0	0	0	167
Line - StrokeWidth	2	0	0	165
Line - Text	2	0	0	165
Line - TheC	0	0	0	167
Line - TheT	1	0	0	166
Line - TheZ	1	0	0	166
Line - Transform	1	0	0	166
Line - Visible	0	0	0	167
Line - X1	5	0	0	162
Line - X2	5	0	0	162
Line - Y1	5	0	0	162
Line - Y2	5	0	0	162
ListAnnotation - AnnotationRef	0	0	0	167
ListAnnotation - Description	0	0	0	167
ListAnnotation - ID	0	0	0	167
ListAnnotation - Namespace	0	0	0	167
LongAnnotation - AnnotationRef	0	0	0	167
LongAnnotation - Description	0	0	0	167
LongAnnotation - ID	1	0	0	166
LongAnnotation - Namespace	1	0	0	166
LongAnnotation - Value	1	0	0	166
Mask - FillColor	1	0	0	166
Mask - FillRule	0	0	0	167
Mask - FontFamily	0	0	0	167
Mask - FontSize	0	0	0	167
Mask - Height	2	0	0	165
Mask - ID	2	0	0	165
Mask - LineCap	0	0	0	167
Mask - Locked	0	0	0	167
Mask - StrokeColor	1	0	0	166
Mask - StrokeDashArray	0	0	0	167
Mask - StrokeWidth	0	0	0	167
Mask - Text	0	0	0	167
Mask - TheC	0	0	0	167
Mask - TheT	0	0	0	167
Mask - TheZ	0	0	0	167
Mask - Transform	0	0	0	167
Mask - Visible	0	0	0	167
Mask - Width	2	0	0	165
Mask - X	2	0	0	165
Mask - Y	2	0	0	165
MicrobeamManipulation - ExperimenterRef	0	0	0	167
MicrobeamManipulation - ID	0	0	0	167
MicrobeamManipulation - ROIRef	0	0	0	167
MicrobeamManipulation - Type	0	0	0	167
MicrobeamManipulationLightSourceSettings - Attenuation	0	0	0	167
MicrobeamManipulationLightSourceSettings - ID	0	0	0	167
MicrobeamManipulationLightSourceSettings - Wavelength	0	0	0	167
Microscope - LotNumber	1	0	0	166
Microscope - Manufacturer	2	0	0	165
Microscope - Model	12	0	0	155
Microscope - SerialNumber	4	0	0	163
Microscope - Type	3	0	0	164
Objective - CalibratedMagnification	9	0	0	158
Objective - Correction	25	0	0	142
Objective - ID	37	0	0	130
Objective - Immersion	26	0	0	141
Objective - Iris	2	0	0	165
Objective - LensNA	21	0	0	146
Objective - LotNumber	1	0	0	166
Objective - Manufacturer	5	0	0	162
Objective - Model	13	0	0	154
Objective - NominalMagnification	28	0	0	139
Objective - SerialNumber	3	0	0	164
Objective - WorkingDistance	10	0	0	157
ObjectiveSettings - CorrectionCollar	1	0	0	166
ObjectiveSettings - ID	32	0	0	135
ObjectiveSettings - Medium	1	0	0	166
ObjectiveSettings - RefractiveIndex	8	0	0	159
Pixels - AnnotationRef	0	0	0	167
Pixels - BigEndian	167	0	0	0
Pixels - DimensionOrder	167	0	0	0
Pixels - ID	167	0	0	0
Pixels - Interleaved	167	0	0	0
Pixels - PhysicalSizeX	87	0	0	80
Pixels - PhysicalSizeY	87	0	0	80
Pixels - PhysicalSizeZ	43	0	0	124
Pixels - SignificantBits	167	0	0	0
Pixels - SizeC	167	0	0	0
Pixels - SizeT	167	0	0	0
Pixels - SizeX	167	0	0	0
Pixels - SizeY	167	0	0	0
Pixels - SizeZ	167	0	0	0
Pixels - TimeIncrement	16	0	0	151
Pixels - Type	167	0	0	0
Plane - AnnotationRef	0	0	0	167
Plane - DeltaT	24	0	0	143
Plane - ExposureTime	31	0	0	136
Plane - HashSHA1	0	0	0	167
Plane - PositionX	28	0	0	139
Plane - PositionY	28	0	0	139
Plane - PositionZ	21	0	0	146
Plane - TheC	167	0	0	0
Plane - TheT	167	0	0	0
Plane - TheZ	167	0	0	0
Plate - AnnotationRef	0	0	0	167
Plate - ColumnNamingConvention	8	0	0	159
Plate - Columns	4	0	0	163
Plate - Description	2	0	0	165
Plate - ExternalIdentifier	3	0	0	164
Plate - ID	10	0	0	157
Plate - Name	9	0	0	158
Plate - RowNamingConvention	8	0	0	159
Plate - Rows	4	0	0	163
Plate - Status	0	0	0	167
Plate - WellOriginX	1	0	0	166
Plate - WellOriginY	1	0	0	166
PlateAcquisition - AnnotationRef	0	0	0	167
PlateAcquisition - Description	0	0	0	167
PlateAcquisition - EndTime	2	0	0	165
PlateAcquisition - ID	8	0	0	159
PlateAcquisition - MaximumFieldCount	8	0	0	159
PlateAcquisition - Name	0	0	0	167
PlateAcquisition - StartTime	3	0	0	164
PlateAcquisition - WellSampleRef	7	0	0	160
Point - FillColor	0	0	0	167
Point - FillRule	0	0	0	167
Point - FontFamily	0	0	0	167
Point - FontSize	1	0	0	166
Point - FontStyle	0	0	0	167
Point - ID	3	0	0	164
Point - LineCap	0	0	0	167
Point - Locked	0	0	0	167
Point - StrokeColor	1	0	0	166
Point - StrokeDashArray	1	0	0	166
Point - StrokeWidth	2	0	0	165
Point - Text	1	0	0	166
Point - TheC	0	0	0	167
Point - TheT	1	0	0	166
Point - TheZ	2	0	0	165
Point - Transform	0	0	0	167
Point - Visible	0	0	0	167
Point - X	3	0	0	164
Point - Y	3	0	0	164
Polygon - FillColor	0	0	0	167
Polygon - FillRule	0	0	0	167
Polygon - FontFamily	0	0	0	167
Polygon - FontSize	2	0	0	165
Polygon - FontStyle	0	0	0	167
Polygon - ID	7	0	0	160
Polygon - LineCap	0	0	0	167
Polygon - Locked	0	0	0	167
Polygon - Points	7	0	0	160
Polygon - StrokeColor	1	0	0	166
Polygon - StrokeDashArray	1	0	0	166
Polygon - StrokeWidth	3	0	0	164
Polygon - Text	2	0	0	165
Polygon - TheC	0	0	0	167
Polygon - TheT	1	0	0	166
Polygon - TheZ	2	0	0	165
Polygon - Transform	1	0	0	166
Polygon - Visible	0	0	0	167
Polyline - FillColor	0	0	0	167
Polyline - FillRule	0	0	0	167
Polyline - FontFamily	0	0	0	167
Polyline - FontSize	2	0	0	165
Polyline - FontStyle	0	0	0	167
Polyline - ID	5	0	0	162
Polyline - LineCap	0	0	0	167
Polyline - Locked	0	0	0	167
Polyline - MarkerEnd	0	0	0	167
Polyline - MarkerStart	0	0	0	167
Polyline - Points	5	0	0	162
Polyline - StrokeColor	1	0	0	166
Polyline - StrokeDashArray	1	0	0	166
Polyline - StrokeWidth	3	0	0	164
Polyline - Text	2	0	0	165
Polyline - TheC	0	0	0	167
Polyline - TheT	1	0	0	166
Polyline - TheZ	2	0	0	165
Polyline - Transform	1	0	0	166
Polyline - Visible	0	0	0	167
Project - AnnotationRef	0	0	0	167
Project - DatasetRef	0	0	0	167
Project - Description	0	0	0	167
Project - ExperimenterGroupRef	0	0	0	167
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