Bio-Formats 5.0.0 Downloads

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  • Full documentation is available as web documentation or PDF documentation.

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Bio-Formats tools downloads

Clients Size File Name Checksum
Bio-Formats Package 16.19 MB bioformats_package.jar b97e1b (MD5)
Command Line Tools 15.18 MB bftools.zip fc63f0 (MD5)
MATLAB Toolbox 15.2 MB bfmatlab.zip 61774b (MD5)
  • bioformats_package.jar is the complete bundle (for end users) containing everything needed to read images into ImageJ using Bio-Formats. Instructions for installing Bio-Formats in ImageJ are available in the user guide.

  • bftools.zip is a bundle of scripts for using Bio-Formats on the command line now with bioformats_package.jar included so you do not have to install both separately. See the command line tools documentation for further information.

  • bfmatlab.zip is a bundle of functions for using Bio-Formats from MATLAB now with bioformats_package.jar included so you do not have to install both separately. See the MATLAB documentation for further information.

Bio-Formats API documentation

API Documentation Size File Name MD5 Checksum
API Documentation Download 11.21 MB bio-formats-javadocs.zip 81a555 (MD5)
  • The Bio-Formats API documentation is also available to read on the web here

Bio-Formats components downloads

Source code

Source Code
GitHub Repository Link
Gitweb Interface Link
GitHub Tag

Legacy versions